Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AP003175.1-201ENST00000641383 6658 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 PSG10P-201ENST00000501199 1500 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AC122713.2-201ENST00000624942 3335 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 LRBA-209ENST00000510413 10032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 TNPO1P2-201ENST00000426249 2665 ntBASIC8.47□□□□□ -1.05
PDZRN3Q9UPQ7 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.05
PDZRN3Q9UPQ7 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC8.46□□□□□ -1.05
PDZRN3Q9UPQ7 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.05
PDZRN3Q9UPQ7 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC8.46□□□□□ -1.05
PDZRN3Q9UPQ7 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
PDZRN3Q9UPQ7 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
PDZRN3Q9UPQ7 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC8.46□□□□□ -1.05
PDZRN3Q9UPQ7 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
PDZRN3Q9UPQ7 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC8.46□□□□□ -1.05
PDZRN3Q9UPQ7 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
PDZRN3Q9UPQ7 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.05
PDZRN3Q9UPQ7 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC8.46□□□□□ -1.05
PDZRN3Q9UPQ7 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AL356057.3-201ENST00000402607 340 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 MIR548P-201ENST00000408336 84 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 RNU2-39P-201ENST00000410604 198 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AL121878.1-201ENST00000418638 859 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 RPL36P18-201ENST00000419316 318 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 VN1R20P-201ENST00000425215 966 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 ARL2BPP10-201ENST00000446487 531 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 COX6CP12-201ENST00000446748 202 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 RN7SL382P-201ENST00000482631 282 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AC008410.1-201ENST00000483777 339 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 RPL24-206ENST00000495401 478 ntTSL 2 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 PCNAP1-201ENST00000505363 709 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 RNA5SP303-201ENST00000516192 130 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 SMARCE1P4-201ENST00000523647 241 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 DEFB130C-202ENST00000530001 230 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AC106734.1-201ENST00000568646 663 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 MIR4789-201ENST00000577469 82 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AL136097.3-201ENST00000611097 505 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AL603758.1-201ENST00000618654 241 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AL122023.1-201ENST00000622847 530 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AC007342.8-201ENST00000623278 678 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AC114546.4-201ENST00000624413 369 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AC107980.1-201ENST00000558671 3355 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 AC005618.1-201ENST00000606901 3148 ntBASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
PDZRN3Q9UPQ7 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 TMEM75-201ENST00000624314 2165 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 PPIAP24-201ENST00000328558 471 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 Y_RNA.452-201ENST00000384202 108 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 AC005522.1-201ENST00000395416 346 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 YWHAZP6-201ENST00000399764 738 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 MIR548I3-201ENST00000408378 149 ntBASIC8.45□□□□□ -1.06
PDZRN3Q9UPQ7 MIR548I1-201ENST00000408810 149 ntBASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms