Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HDAC6Q9UBN7 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
HDAC6Q9UBN7 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.79□□□□□ -1.48
HDAC6Q9UBN7 IRF5P1-201ENST00000504852 2164 ntBASIC5.79□□□□□ -1.48
HDAC6Q9UBN7 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HDAC6Q9UBN7 PCAT14-202ENST00000627127 3935 ntBASIC5.79□□□□□ -1.48
HDAC6Q9UBN7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AC004817.4-201ENST00000602396 3625 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 RN7SKP95-201ENST00000362860 303 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 COX5BP7-201ENST00000414780 274 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 COX6B1P1-201ENST00000415962 213 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 MTND2P15-201ENST00000418575 892 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 DDX39BP1-205ENST00000422507 192 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 HSPE1P16-201ENST00000426640 348 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 RPS26P4-201ENST00000431743 355 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 CEACAMP9-201ENST00000442990 513 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 TCEA1P3-201ENST00000443005 880 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 GXYLT1P1-201ENST00000446657 490 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AC078857.1-201ENST00000469870 667 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 ENPP7P11-201ENST00000505915 627 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AC093770.1-201ENST00000511559 571 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AL671862.1-201ENST00000515851 349 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 RNU6-513P-201ENST00000516104 104 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 SNORA76.2-201ENST00000517095 137 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AC087283.1-201ENST00000604029 1074 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AC018645.2-201ENST00000609151 472 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 AC009501.3-201ENST00000605001 1352 ntBASIC5.78□□□□□ -1.48
HDAC6Q9UBN7 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AC012618.3-205ENST00000637896 1496 ntBASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 DPY19L2P2-203ENST00000435536 1858 ntBASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AL356317.1-201ENST00000396110 1436 ntBASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AC092111.2-201ENST00000611627 1414 ntBASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AC005005.4-201ENST00000623789 16698 ntBASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 RNA5SP296-201ENST00000410523 111 ntBASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 SETP15-201ENST00000412724 337 ntBASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 MTND2P9-201ENST00000422293 931 ntBASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 RPL34P20-201ENST00000442771 351 ntBASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AC016772.1-201ENST00000444170 1261 ntBASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AC021660.1-201ENST00000465006 554 ntBASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 RPL23AP73-201ENST00000492507 471 ntBASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AC023424.1-201ENST00000496058 459 ntBASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.77□□□□□ -1.49
HDAC6Q9UBN7 AC100784.1-201ENST00000522790 310 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms