Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 OR5B10P-201ENST00000532869 642 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 AC108738.1-201ENST00000603703 237 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 AP000756.2-201ENST00000624168 2567 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 MAX-203ENST00000341653 330 ntTSL 2 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 Y_RNA.510-201ENST00000384511 114 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 AL390316.1-201ENST00000406279 553 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 RNF10P1-201ENST00000418589 369 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 AL136231.1-201ENST00000429407 730 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 NDUFA5P1-201ENST00000433858 341 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 AC097523.2-201ENST00000435551 652 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 YWHABP1-201ENST00000445359 727 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 PLGLA-201ENST00000465668 449 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 PCA3_2.1-201ENST00000612507 409 ntBASIC4.44□□□□□ -1.7
CHD8Q9HCK8 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 MYO6-202ENST00000369977 5597 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHD8Q9HCK8 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AC010300.1-201ENST00000600671 5134 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 MT-RNR1-201ENST00000389680 954 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 RPS27AP11-201ENST00000402798 447 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 BX323845.1-201ENST00000432417 179 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AC073410.1-201ENST00000435125 589 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AL157884.3-201ENST00000448273 1184 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AP001486.1-201ENST00000463339 476 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AC116562.1-201ENST00000485355 781 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 GTF2IP8-201ENST00000560687 584 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 MIR3653-201ENST00000625572 110 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AL161909.1-201ENST00000397390 712 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 RN7SKP159-201ENST00000410657 292 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AC116036.1-201ENST00000412199 367 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 AP003497.2-201ENST00000624220 967 ntBASIC4.43□□□□□ -1.7
CHD8Q9HCK8 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 ALB-220ENST00000621628 1606 ntTSL 5 BASIC4.43□□□□□ -1.7
CHD8Q9HCK8 DCN-218ENST00000551354 2924 ntTSL 3 BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CHD8Q9HCK8 AL451142.1-201ENST00000375867 775 ntBASIC4.42□□□□□ -1.7
CHD8Q9HCK8 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms