Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM4Q9C037 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM4Q9C037 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 RN7SKP113-201ENST00000363891 295 ntBASIC5.02□□□□□ -1.61
TRIM4Q9C037 AL353625.1-202ENST00000366273 571 ntBASIC5.02□□□□□ -1.61
TRIM4Q9C037 AL133388.1-201ENST00000404509 287 ntBASIC5.02□□□□□ -1.61
TRIM4Q9C037 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 RN7SKP16-201ENST00000410180 299 ntBASIC5.02□□□□□ -1.61
TRIM4Q9C037 RNA5SP146-201ENST00000410743 123 ntBASIC5.02□□□□□ -1.61
TRIM4Q9C037 AL590139.1-201ENST00000416267 400 ntBASIC5.02□□□□□ -1.61
TRIM4Q9C037 AC019050.1-201ENST00000418508 492 ntBASIC5.02□□□□□ -1.61
TRIM4Q9C037 AC008072.1-201ENST00000434254 824 ntBASIC5.02□□□□□ -1.61
TRIM4Q9C037 GSTM5P1-201ENST00000434751 660 ntBASIC5.02□□□□□ -1.61
TRIM4Q9C037 AL138878.2-201ENST00000440581 1241 ntBASIC5.02□□□□□ -1.61
TRIM4Q9C037 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 AC105399.1-202ENST00000447303 205 ntBASIC5.02□□□□□ -1.61
TRIM4Q9C037 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 RNA5SP373-201ENST00000517271 95 ntBASIC5.02□□□□□ -1.61
TRIM4Q9C037 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 HMGB1P40-201ENST00000525121 540 ntBASIC5.02□□□□□ -1.61
TRIM4Q9C037 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM4Q9C037 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.02□□□□□ -1.61
TRIM4Q9C037 AC069307.1-201ENST00000602820 447 ntBASIC5.02□□□□□ -1.61
TRIM4Q9C037 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM4Q9C037 MTND4P26-201ENST00000415971 1359 ntBASIC5.02□□□□□ -1.61
TRIM4Q9C037 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM4Q9C037 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
TRIM4Q9C037 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM4Q9C037 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM4Q9C037 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM4Q9C037 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM4Q9C037 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM4Q9C037 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM4Q9C037 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM4Q9C037 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TRIM4Q9C037 MTND5P12-201ENST00000502851 1449 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
TRIM4Q9C037 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM4Q9C037 RNA5SP505-201ENST00000364748 108 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM4Q9C037 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM4Q9C037 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 DSTNP5-201ENST00000427921 523 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 RPL35AP21-201ENST00000437667 333 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 MTND6P18-201ENST00000439477 513 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.01□□□□□ -1.61
TRIM4Q9C037 RPL7P41-201ENST00000485823 957 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 AC015864.1-201ENST00000496512 544 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 RPS24P16-201ENST00000497294 392 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 RPS27AP18-201ENST00000515536 459 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 RNU6-1334P-201ENST00000516032 105 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM4Q9C037 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.01□□□□□ -1.61
TRIM4Q9C037 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.01□□□□□ -1.61
TRIM4Q9C037 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM4Q9C037 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM4Q9C037 BNIP3P22-201ENST00000593399 556 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM4Q9C037 AL162431.4-201ENST00000604674 411 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 AC011626.1-201ENST00000604710 562 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 EIF3FP1-201ENST00000613970 806 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM4Q9C037 AC087385.3-201ENST00000620477 187 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM4Q9C037 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC5.01□□□□□ -1.61
TRIM4Q9C037 AC015813.6-201ENST00000624409 5808 ntBASIC5.01□□□□□ -1.61
TRIM4Q9C037 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.01□□□□□ -1.61
TRIM4Q9C037 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
TRIM4Q9C037 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM4Q9C037 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM4Q9C037 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
TRIM4Q9C037 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM4Q9C037 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM4Q9C037 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
TRIM4Q9C037 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5□□□□□ -1.61
TRIM4Q9C037 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5□□□□□ -1.61
TRIM4Q9C037 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5□□□□□ -1.61
TRIM4Q9C037 ATG4AP1-201ENST00000416893 538 ntBASIC5□□□□□ -1.61
TRIM4Q9C037 AC073136.2-201ENST00000417282 849 ntBASIC5□□□□□ -1.61
TRIM4Q9C037 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5□□□□□ -1.61
TRIM4Q9C037 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5□□□□□ -1.61
TRIM4Q9C037 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5□□□□□ -1.61
TRIM4Q9C037 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5□□□□□ -1.61
TRIM4Q9C037 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5□□□□□ -1.61
TRIM4Q9C037 GAPDHP25-201ENST00000447061 1001 ntBASIC5□□□□□ -1.61
TRIM4Q9C037 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5□□□□□ -1.61
TRIM4Q9C037 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms