Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC138393.1-206ENST00000540997 1886 ntBASIC6.4□□□□□ -1.39
FOXP3Q9BZS1 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
FOXP3Q9BZS1 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
FOXP3Q9BZS1 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC6.4□□□□□ -1.39
FOXP3Q9BZS1 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
FOXP3Q9BZS1 AC005539.1-201ENST00000443768 1479 ntBASIC6.4□□□□□ -1.39
FOXP3Q9BZS1 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
FOXP3Q9BZS1 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
FOXP3Q9BZS1 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
FOXP3Q9BZS1 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.4□□□□□ -1.39
FOXP3Q9BZS1 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC083837.1-201ENST00000565297 2994 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 RPL11P4-201ENST00000332269 436 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 RN7SKP269-201ENST00000365545 319 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 RNA5SP122-201ENST00000384457 108 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 MIR142-201ENST00000384835 87 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 TAF9BP1-201ENST00000396646 746 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC007068.1-201ENST00000396690 844 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC003045.1-201ENST00000398779 713 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 YWHAZP6-201ENST00000399764 738 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 NACAP7-201ENST00000407371 609 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AL513325.1-201ENST00000417716 1034 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC083862.1-201ENST00000427378 1242 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 IGLV3-4-201ENST00000432300 244 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AL731534.1-201ENST00000434711 269 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AL121601.2-201ENST00000438019 707 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 MTND1P30-201ENST00000441241 901 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC016908.1-201ENST00000442571 1219 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 POU5F1P5-201ENST00000445059 658 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 USP9YP29-201ENST00000445112 563 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 KATNBL1P6-201ENST00000453433 915 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 RANP2-201ENST00000456833 229 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 RN7SL714P-201ENST00000487050 298 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 RN7SL362P-201ENST00000494228 267 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 MTND2P33-201ENST00000506452 1031 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 RPL37P25-201ENST00000507308 276 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 PGBD4P4-201ENST00000509673 613 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 IGHV4-55-201ENST00000520889 368 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC006512.2-201ENST00000543250 486 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 RPL3P13-201ENST00000550415 216 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC026826.3-201ENST00000561747 158 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AL078601.3-201ENST00000573303 535 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 MTND1P15-201ENST00000579262 949 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 MIR4502-201ENST00000580432 81 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AL353621.2-201ENST00000605340 133 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC025594.3-201ENST00000613068 790 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AP001052.1-201ENST00000626421 99 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 PCMTD1P7-201ENST00000634506 357 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC087821.2-201ENST00000637086 450 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AP002512.4-202ENST00000641599 4530 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 AC092447.7-201ENST00000422212 1621 ntBASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
FOXP3Q9BZS1 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms