Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RPAP1Q9BWH6 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
RPAP1Q9BWH6 NCLP2-201ENST00000416078 1462 ntBASIC5.84□□□□□ -1.48
RPAP1Q9BWH6 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.84□□□□□ -1.48
RPAP1Q9BWH6 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 U3.35-201ENST00000408405 208 ntBASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 TBCAP2-201ENST00000416175 326 ntBASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 AC010733.1-201ENST00000451515 401 ntBASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 RNA5SP103-201ENST00000459503 118 ntBASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 RPL12P20-201ENST00000475538 479 ntBASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 AC017007.3-201ENST00000479865 435 ntBASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 AC090686.1-201ENST00000481577 749 ntBASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 BUD31P1-201ENST00000521828 359 ntBASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 AC105036.1-201ENST00000566222 271 ntBASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 AL139041.1-201ENST00000605480 610 ntBASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 AC021106.3-201ENST00000623925 531 ntBASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 AC016717.3-201ENST00000624730 554 ntBASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 ZFRP1-201ENST00000457579 2970 ntBASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
RPAP1Q9BWH6 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 OR4K15-201ENST00000305051 1216 ntBASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 RNU6-233P-201ENST00000410845 141 ntBASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 SETP15-201ENST00000412724 337 ntBASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 AC092162.1-201ENST00000432828 434 ntBASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 RPS5P7-201ENST00000456664 608 ntBASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 AC020890.1-201ENST00000491837 504 ntBASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 IGKV2D-10-201ENST00000520194 281 ntBASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 OR5M2P-201ENST00000529003 936 ntBASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 AC105129.1-201ENST00000560250 297 ntBASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 AC007497.1-201ENST00000610421 561 ntBASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 MIR8069-1-201ENST00000616627 86 ntBASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 MIR6853-201ENST00000619642 74 ntBASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 MIR8069-2-201ENST00000621412 86 ntBASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 AL078595.2-201ENST00000605309 1780 ntBASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 AC139426.3-201ENST00000605648 2059 ntBASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.82□□□□□ -1.48
RPAP1Q9BWH6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 AL590240.1-201ENST00000334118 313 ntBASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 AL161722.1-201ENST00000446972 1032 ntBASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 AL445433.1-201ENST00000457507 257 ntBASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 RPS23P7-201ENST00000466210 444 ntBASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 MIR6758-201ENST00000620653 63 ntBASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 Z98755.1-201ENST00000407015 1384 ntBASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 KARSP3-201ENST00000571212 1504 ntBASIC5.81□□□□□ -1.48
RPAP1Q9BWH6 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms