Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC7.65□□□□□ -1.18
IFT140Q96RY7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
IFT140Q96RY7 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
IFT140Q96RY7 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
IFT140Q96RY7 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC7.65□□□□□ -1.18
IFT140Q96RY7 GCA-203ENST00000429691 824 ntTSL 3 BASIC7.65□□□□□ -1.18
IFT140Q96RY7 AC007389.2-201ENST00000434630 306 ntBASIC7.65□□□□□ -1.18
IFT140Q96RY7 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC7.65□□□□□ -1.18
IFT140Q96RY7 OR4A6P-201ENST00000534364 970 ntBASIC7.65□□□□□ -1.18
IFT140Q96RY7 PYM1-205ENST00000547925 499 ntTSL 3 BASIC7.65□□□□□ -1.18
IFT140Q96RY7 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC7.65□□□□□ -1.18
IFT140Q96RY7 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC7.65□□□□□ -1.18
IFT140Q96RY7 AGGF1P6-201ENST00000569213 976 ntBASIC7.65□□□□□ -1.18
IFT140Q96RY7 AC010480.1-201ENST00000624823 684 ntBASIC7.65□□□□□ -1.18
IFT140Q96RY7 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
IFT140Q96RY7 AC138907.8-201ENST00000623981 2256 ntBASIC7.65□□□□□ -1.18
IFT140Q96RY7 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC7.65□□□□□ -1.18
IFT140Q96RY7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC7.65□□□□□ -1.19
IFT140Q96RY7 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC7.64□□□□□ -1.19
IFT140Q96RY7 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
IFT140Q96RY7 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
IFT140Q96RY7 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
IFT140Q96RY7 SNORA9-201ENST00000384215 133 ntBASIC7.64□□□□□ -1.19
IFT140Q96RY7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
IFT140Q96RY7 EIF4EBP2P3-201ENST00000403144 334 ntBASIC7.64□□□□□ -1.19
IFT140Q96RY7 RPL12P9-201ENST00000412942 488 ntBASIC7.64□□□□□ -1.19
IFT140Q96RY7 CRYBB2P1-203ENST00000415709 538 ntBASIC7.64□□□□□ -1.19
IFT140Q96RY7 AC092162.1-201ENST00000432828 434 ntBASIC7.64□□□□□ -1.19
IFT140Q96RY7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
IFT140Q96RY7 RN7SL197P-201ENST00000466981 299 ntBASIC7.64□□□□□ -1.19
IFT140Q96RY7 MTND4LP31-201ENST00000514859 294 ntBASIC7.64□□□□□ -1.19
IFT140Q96RY7 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.64□□□□□ -1.19
IFT140Q96RY7 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.64□□□□□ -1.19
IFT140Q96RY7 AC006116.5-201ENST00000591936 559 ntBASIC7.64□□□□□ -1.19
IFT140Q96RY7 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC7.64□□□□□ -1.19
IFT140Q96RY7 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC7.64□□□□□ -1.19
IFT140Q96RY7 AC012442.3-202ENST00000636742 206 ntBASIC7.64□□□□□ -1.19
IFT140Q96RY7 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC7.64□□□□□ -1.19
IFT140Q96RY7 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC7.64□□□□□ -1.19
IFT140Q96RY7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.64□□□□□ -1.19
IFT140Q96RY7 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC7.64□□□□□ -1.19
IFT140Q96RY7 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC7.64□□□□□ -1.19
IFT140Q96RY7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
IFT140Q96RY7 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.64□□□□□ -1.19
IFT140Q96RY7 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
IFT140Q96RY7 RNU6ATAC-201ENST00000408749 126 ntBASIC7.63□□□□□ -1.19
IFT140Q96RY7 NFYAP1-201ENST00000431953 972 ntBASIC7.63□□□□□ -1.19
IFT140Q96RY7 AC138761.5-201ENST00000433967 325 ntBASIC7.63□□□□□ -1.19
IFT140Q96RY7 AL133547.1-201ENST00000448546 220 ntBASIC7.63□□□□□ -1.19
IFT140Q96RY7 RPL35P6-201ENST00000490024 372 ntBASIC7.63□□□□□ -1.19
IFT140Q96RY7 AC146944.2-203ENST00000502493 354 ntBASIC7.63□□□□□ -1.19
IFT140Q96RY7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
IFT140Q96RY7 AC006499.6-201ENST00000511169 607 ntBASIC7.63□□□□□ -1.19
IFT140Q96RY7 AC139495.1-202ENST00000513164 354 ntBASIC7.63□□□□□ -1.19
IFT140Q96RY7 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
IFT140Q96RY7 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC7.63□□□□□ -1.19
IFT140Q96RY7 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC7.63□□□□□ -1.19
IFT140Q96RY7 AL121834.1-201ENST00000572284 509 ntBASIC7.63□□□□□ -1.19
IFT140Q96RY7 RN7SL339P-201ENST00000580597 296 ntBASIC7.63□□□□□ -1.19
IFT140Q96RY7 AC011815.3-201ENST00000624194 473 ntBASIC7.63□□□□□ -1.19
IFT140Q96RY7 AC000095.2-202ENST00000637415 154 ntBASIC7.63□□□□□ -1.19
IFT140Q96RY7 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
IFT140Q96RY7 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC7.63□□□□□ -1.19
IFT140Q96RY7 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.63□□□□□ -1.19
IFT140Q96RY7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
IFT140Q96RY7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
IFT140Q96RY7 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
IFT140Q96RY7 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC7.63□□□□□ -1.19
IFT140Q96RY7 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC7.63□□□□□ -1.19
IFT140Q96RY7 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
IFT140Q96RY7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
IFT140Q96RY7 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
IFT140Q96RY7 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC7.62□□□□□ -1.19
IFT140Q96RY7 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
IFT140Q96RY7 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
IFT140Q96RY7 MIR449B-201ENST00000384995 97 ntBASIC7.62□□□□□ -1.19
IFT140Q96RY7 PVALB-202ENST00000404171 422 ntTSL 2 BASIC7.62□□□□□ -1.19
IFT140Q96RY7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
IFT140Q96RY7 RNU4-64P-201ENST00000410795 131 ntBASIC7.62□□□□□ -1.19
IFT140Q96RY7 AL136231.1-201ENST00000429407 730 ntBASIC7.62□□□□□ -1.19
IFT140Q96RY7 PRPF38AP1-201ENST00000451976 933 ntBASIC7.62□□□□□ -1.19
IFT140Q96RY7 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC7.62□□□□□ -1.19
IFT140Q96RY7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC7.62□□□□□ -1.19
IFT140Q96RY7 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC7.62□□□□□ -1.19
IFT140Q96RY7 AC017100.2-201ENST00000584628 355 ntBASIC7.62□□□□□ -1.19
IFT140Q96RY7 AL352984.2-202ENST00000613699 155 ntBASIC7.62□□□□□ -1.19
IFT140Q96RY7 PAPPA-AS1-201ENST00000445861 2450 ntBASIC7.62□□□□□ -1.19
IFT140Q96RY7 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
IFT140Q96RY7 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
IFT140Q96RY7 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
IFT140Q96RY7 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
IFT140Q96RY7 AC027228.2-201ENST00000567141 2154 ntBASIC7.62□□□□□ -1.19
IFT140Q96RY7 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.62□□□□□ -1.19
IFT140Q96RY7 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
IFT140Q96RY7 AC091390.3-201ENST00000426478 338 ntBASIC7.62□□□□□ -1.19
IFT140Q96RY7 AC018644.1-201ENST00000429934 551 ntBASIC7.62□□□□□ -1.19
IFT140Q96RY7 ARL4AP4-201ENST00000434170 518 ntBASIC7.62□□□□□ -1.19
IFT140Q96RY7 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
IFT140Q96RY7 RPL5P32-201ENST00000454085 879 ntBASIC7.62□□□□□ -1.19
IFT140Q96RY7 AC008958.1-201ENST00000511047 682 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms