Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 RNU6-374P-201ENST00000364146 108 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 RNU6-348P-201ENST00000384386 107 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AL161909.1-201ENST00000397390 712 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 RPL21P50-201ENST00000417698 477 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 UBTFL3-201ENST00000418934 1024 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 OSTCP4-201ENST00000424397 449 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AL139158.1-201ENST00000424719 340 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 MTND1P28-201ENST00000435623 950 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AL512286.1-201ENST00000439244 400 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 VN1R38P-201ENST00000450265 887 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 BX248409.1-201ENST00000455497 255 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 UBTFL6-201ENST00000477929 1024 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 TMED11P-201ENST00000479478 690 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC004924.1-201ENST00000480160 781 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC092824.1-201ENST00000483524 576 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 RPS4XP15-201ENST00000489210 795 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AL117692.1-201ENST00000494283 713 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 PRDX4P1-201ENST00000507189 574 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC106800.3-201ENST00000511389 308 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 IGKV1D-22-201ENST00000518953 324 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 OR5AK1P-201ENST00000524837 922 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 GTF2IP22-201ENST00000554443 182 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 ZNF519P2-201ENST00000557032 169 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 MIR548Y-201ENST00000582739 110 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC083760.1-201ENST00000589621 670 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC015871.2-201ENST00000603605 948 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AP002360.3-201ENST00000607673 710 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC025253.1-201ENST00000613623 543 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 MIR6811-201ENST00000620409 58 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC073869.7-201ENST00000640874 297 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 MTND5P23-201ENST00000430812 1655 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 ZNF402P-201ENST00000404435 3100 ntBASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.01□□□□□ -1.45
PTCHD1Q96NR3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6□□□□□ -1.45
PTCHD1Q96NR3 CASC19-246ENST00000641625 1606 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 AC105749.1-201ENST00000631338 2008 ntBASIC6□□□□□ -1.45
PTCHD1Q96NR3 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
PTCHD1Q96NR3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms