Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AL451049.1-201ENST00000608672 497 ntBASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 AL391834.1-201ENST00000609609 560 ntBASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 RPSAP73-201ENST00000614820 330 ntBASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 AC016957.2-201ENST00000616998 848 ntBASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 MIR8080-201ENST00000622224 89 ntBASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 MTCO1P15-201ENST00000529569 1526 ntBASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SLC44A1Q8WWI5 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 RN7SKP124-201ENST00000364730 341 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 RNU6-650P-201ENST00000365658 111 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 GSTA12P-201ENST00000402398 508 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AL391361.1-201ENST00000405580 489 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 OR3A2-201ENST00000408891 1076 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 RN7SKP97-201ENST00000410966 333 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AL390774.1-201ENST00000411924 246 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 RNA5SP103-201ENST00000459503 118 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 NPM1P17-201ENST00000479221 602 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 MTND4P9-201ENST00000507819 1346 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 RNA5SP249-201ENST00000516127 99 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 EIF4A2P5-201ENST00000529914 499 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 RARSP1-201ENST00000542842 1418 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 NOP56P3-201ENST00000549457 385 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AC126177.5-201ENST00000549599 178 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 BMS1P7-201ENST00000602440 1052 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 MTATP6P2-201ENST00000603319 678 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AC022106.2-201ENST00000620114 757 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AL049777.1-201ENST00000622740 518 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 AL022322.2-201ENST00000624072 20397 ntBASIC5.1□□□□□ -1.59
SLC44A1Q8WWI5 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 ZNF652P1-201ENST00000442420 1309 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AC235565.1-201ENST00000456962 1325 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 CIR1P2-201ENST00000514821 1342 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 RN7SKP160-201ENST00000363804 340 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 RNA5SP132-201ENST00000364725 118 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 MIR143-201ENST00000385300 106 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 RNU1-77P-201ENST00000390868 162 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 RNU2-22P-201ENST00000411266 212 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 BTF3P9-201ENST00000418784 283 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 ARL2BPP3-201ENST00000421226 480 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 TXNP5-201ENST00000441043 315 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AL031584.1-201ENST00000447169 754 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 RBMY2TP-201ENST00000451162 947 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AC110749.1-201ENST00000462007 357 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 RPS26P39-201ENST00000469206 341 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 RN7SL177P-201ENST00000476596 299 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AC021087.2-201ENST00000504656 1203 ntBASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.09□□□□□ -1.59
SLC44A1Q8WWI5 AC119751.4-201ENST00000507498 357 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 192.4 ms