Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 MIR600-201ENST00000385007 98 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AL133325.1-201ENST00000421090 382 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AC006065.1-201ENST00000422539 802 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AC093655.2-201ENST00000425735 631 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 RNF19BPX-201ENST00000426224 625 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AC022022.1-201ENST00000430304 178 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 SCAND3P1-201ENST00000439854 1060 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 EIF1P7-201ENST00000487533 337 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AL117692.1-201ENST00000494283 713 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 RPS4XP20-201ENST00000505751 772 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AC090515.3-201ENST00000560431 315 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AP005432.2-201ENST00000608162 586 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AL356274.1-201ENST00000617064 410 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AC012414.7-202ENST00000622705 1090 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AL118508.4-201ENST00000624142 1176 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AC104820.1-201ENST00000624183 307 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 AL356489.2-201ENST00000566968 3528 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 DDX18P4-201ENST00000511690 1966 ntBASIC4.13□□□□□ -1.75
CCDC71LQ8N9Z2 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC090017.1-201ENST00000548612 1779 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 OR5T3-201ENST00000303059 1023 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 RNA5SP234-201ENST00000363916 119 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 RNA5SP339-201ENST00000390987 122 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 MIR1182-201ENST00000408363 97 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 SDHDP6-201ENST00000414693 480 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC004690.1-201ENST00000418216 328 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC093084.1-201ENST00000424233 687 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 RPS29P9-201ENST00000440360 171 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AL450023.3-201ENST00000440592 271 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 ARL4AP3-201ENST00000441452 574 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC073587.1-201ENST00000447093 876 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AL354710.1-201ENST00000453641 246 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 HMGB1P4-201ENST00000455362 567 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 RPL7P45-201ENST00000455851 743 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC011225.1-201ENST00000457751 369 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC100832.1-201ENST00000471945 383 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 RN7SL558P-201ENST00000497468 299 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 RPEP1-201ENST00000504507 658 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 RN7SKP183-201ENST00000517169 324 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 OR7E10P-201ENST00000526420 991 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 MIR1273E-201ENST00000581165 102 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 BMS1P7-201ENST00000602440 1052 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC104687.2-201ENST00000604442 342 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 AC010245.2-201ENST00000606908 1167 ntBASIC4.12□□□□□ -1.75
CCDC71LQ8N9Z2 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms