Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 FKBP1AP1-201ENST00000594588 318 ntBASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 IMMP1LP3-201ENST00000604197 224 ntBASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 AC096553.1-201ENST00000605169 829 ntBASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 AC073055.1-201ENST00000456901 1621 ntBASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
LRRTM4Q86VH4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 MAPK10-338ENST00000641647 3362 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AC114774.1-201ENST00000507410 1770 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AC079097.1-201ENST00000512187 1399 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 U6.112-201ENST00000384129 70 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 SNORA16A-201ENST00000384342 137 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 RNU6-932P-201ENST00000391108 106 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 U3.28-201ENST00000391249 210 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 GNG5P5-201ENST00000420444 220 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 PPIAP13-201ENST00000434706 478 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AC073465.2-201ENST00000440938 498 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AC011225.1-201ENST00000457751 369 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AL161747.1-201ENST00000480068 358 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 RN7SL423P-201ENST00000486202 304 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 IGKV2-36-201ENST00000519999 223 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AC138701.1-201ENST00000524329 714 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 HMGB1P40-201ENST00000525121 540 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AC005341.1-201ENST00000571086 708 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AC011458.1-201ENST00000604034 617 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 BNIP3P35-201ENST00000604530 490 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AC112503.1-201ENST00000608436 391 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AL139124.1-201ENST00000609123 421 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AC243654.2-201ENST00000612843 443 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AL121890.3-201ENST00000618494 516 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AC022079.2-201ENST00000619739 566 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AC005618.4-201ENST00000625053 554 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AL445984.1-201ENST00000637834 659 ntBASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LRRTM4Q86VH4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRTM4Q86VH4 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.34□□□□□ -1.55
LRRTM4Q86VH4 AC005332.5-201ENST00000591222 2919 ntBASIC5.34□□□□□ -1.55
LRRTM4Q86VH4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRTM4Q86VH4 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRTM4Q86VH4 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRTM4Q86VH4 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRTM4Q86VH4 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRTM4Q86VH4 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LRRTM4Q86VH4 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LRRTM4Q86VH4 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.34□□□□□ -1.55
LRRTM4Q86VH4 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 508.9 ms