Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 RNA5SP110-201ENST00000362638 115 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC119751.3-201ENST00000399720 670 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 ERHP2-201ENST00000402323 299 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 RN7SKP278-201ENST00000410504 342 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC099677.3-201ENST00000427081 395 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 FAM96AP1-201ENST00000430879 482 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AL359265.1-201ENST00000440296 795 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 TXNP5-201ENST00000441043 315 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC012512.1-201ENST00000446594 718 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC007327.1-201ENST00000447461 264 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC233982.1-201ENST00000451247 436 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC073476.1-201ENST00000452854 407 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 RPL10P17-201ENST00000453852 316 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 RPS4XP12-201ENST00000461747 709 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 RPL7AP10-201ENST00000481016 791 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 BOLA3P3-201ENST00000505182 232 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 GAPDHP62-201ENST00000515313 990 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 UBTFL10-201ENST00000528532 562 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AP001269.3-201ENST00000588718 329 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC009027.1-201ENST00000604510 479 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 RFPL4AP6-201ENST00000616792 846 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AL512652.1-201ENST00000619006 500 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AL158163.2-201ENST00000619110 700 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 SAMMSON-227ENST00000642114 1199 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC104964.3-201ENST00000606115 2860 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 ZNF876P-202ENST00000398732 1485 ntBASIC5.51□□□□□ -1.53
RNF220Q5VTB9 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.51□□□□□ -1.53
RNF220Q5VTB9 AC019072.1-201ENST00000604535 1551 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 snoZ40.1-201ENST00000364540 72 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 RNU1-74P-201ENST00000384108 171 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 MIR191-201ENST00000384873 92 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 MTCO2P20-201ENST00000437339 673 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 Z77249.1-201ENST00000444622 1175 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 KF459542.1-201ENST00000450908 553 ntBASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC5.5□□□□□ -1.53
RNF220Q5VTB9 AC093166.2-201ENST00000455969 1017 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms