Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RNA5SP132-201ENST00000364725 118 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 RNU6-1242P-201ENST00000391052 103 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 TMSB4XP8-201ENST00000402089 135 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 TMSB4XP6-201ENST00000415187 135 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 DPPA2P2-201ENST00000418220 897 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 TMSB4XP1-201ENST00000424567 135 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 RPS6P15-201ENST00000431996 751 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 HSD52-202ENST00000436225 772 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC092809.1-201ENST00000441469 474 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 RPS7P3-201ENST00000443360 580 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC073909.1-201ENST00000447112 999 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 RPL23AP60-201ENST00000450011 454 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AL354710.1-201ENST00000453641 246 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC026348.1-201ENST00000462549 1053 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 IGBP1P5-201ENST00000507524 1000 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 IGKV2-18-201ENST00000522607 343 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC145350.1-201ENST00000567426 208 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC022662.1-201ENST00000580252 331 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC069366.1-201ENST00000583159 838 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC008751.2-201ENST00000597885 980 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 SDR42E1P1-201ENST00000611327 477 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 MIR6719-201ENST00000622428 87 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC120349.3-201ENST00000624377 529 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 CDRT1-208ENST00000630868 794 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 ATE1-AS1-202ENST00000636460 506 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 ZNF876P-202ENST00000398732 1485 ntBASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.72□□□□□ -1.33
CCDC144BQ3MJ40 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC144BQ3MJ40 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.71□□□□□ -1.33
CCDC144BQ3MJ40 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.33
CCDC144BQ3MJ40 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC6.71□□□□□ -1.33
CCDC144BQ3MJ40 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC144BQ3MJ40 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
CCDC144BQ3MJ40 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 SGO1P1-201ENST00000603525 1447 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 NACA3P-201ENST00000359690 648 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 SNORA40.2-201ENST00000390847 128 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 OR2AT2P-201ENST00000413438 905 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 MRPL53P1-201ENST00000414323 319 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AK4P4-201ENST00000419465 646 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AL662874.1-201ENST00000426065 230 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 RPL7P4-203ENST00000430239 730 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AL445928.1-201ENST00000435545 222 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 MRPL42P4-201ENST00000453267 443 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AC087672.1-201ENST00000479876 766 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AC109481.1-201ENST00000509173 282 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AC119751.5-201ENST00000514077 770 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 SNORA3.4-201ENST00000515969 96 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 snoU109.5-201ENST00000516231 132 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 MRPS36P3-201ENST00000519284 130 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 BPTFP1-201ENST00000579209 492 ntBASIC6.71□□□□□ -1.34
CCDC144BQ3MJ40 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms