Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
USP41Q3LFD5 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.46□□□□□ -1.54
USP41Q3LFD5 AC105254.2-201ENST00000603636 436 ntBASIC5.46□□□□□ -1.54
USP41Q3LFD5 MEMO1P5-201ENST00000604810 406 ntBASIC5.46□□□□□ -1.54
USP41Q3LFD5 AC144521.1-201ENST00000607148 956 ntBASIC5.46□□□□□ -1.54
USP41Q3LFD5 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.46□□□□□ -1.54
USP41Q3LFD5 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.46□□□□□ -1.54
USP41Q3LFD5 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.46□□□□□ -1.54
USP41Q3LFD5 AL592494.2-201ENST00000425455 1548 ntBASIC5.46□□□□□ -1.54
USP41Q3LFD5 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.46□□□□□ -1.54
USP41Q3LFD5 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.46□□□□□ -1.54
USP41Q3LFD5 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
USP41Q3LFD5 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
USP41Q3LFD5 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.46□□□□□ -1.54
USP41Q3LFD5 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
USP41Q3LFD5 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
USP41Q3LFD5 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
USP41Q3LFD5 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
USP41Q3LFD5 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 ADAM5-202ENST00000399789 1942 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP41Q3LFD5 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
USP41Q3LFD5 AC025574.1-201ENST00000554784 1653 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
USP41Q3LFD5 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP41Q3LFD5 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
USP41Q3LFD5 RN7SKP74-201ENST00000362849 309 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 SNORA56-201ENST00000383966 129 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 GAPDHP15-201ENST00000398586 975 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 AC016772.1-201ENST00000444170 1261 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 AC015908.1-201ENST00000478739 476 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 RPS12P31-201ENST00000491419 398 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 BTF3P13-201ENST00000513224 490 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 HIGD1AP5-201ENST00000529959 259 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 NOP56P3-201ENST00000549457 385 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 AC009117.1-201ENST00000563948 554 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 AC005242.1-201ENST00000585658 438 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 BMS1P7-201ENST00000602440 1052 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 AC087283.1-201ENST00000604029 1074 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 AL096803.3-201ENST00000609032 532 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 AL356608.1-201ENST00000610034 820 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 AC025016.1-201ENST00000616746 682 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 FRG1EP-201ENST00000634469 770 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 PROS2P-201ENST00000474651 1951 ntBASIC5.45□□□□□ -1.54
USP41Q3LFD5 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
USP41Q3LFD5 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.45□□□□□ -1.54
USP41Q3LFD5 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 CTSL3P-202ENST00000412179 788 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 RANP4-201ENST00000413361 655 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.44□□□□□ -1.54
USP41Q3LFD5 AC046176.1-201ENST00000435260 1170 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 ELOCP3-201ENST00000439303 348 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 AL137845.2-201ENST00000444292 988 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 AC112498.1-201ENST00000444401 332 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 AC006326.1-201ENST00000445465 787 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 AC012512.1-201ENST00000446594 718 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 AL354714.3-201ENST00000447284 493 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 RN7SL443P-201ENST00000464331 290 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 AC020779.1-201ENST00000478757 796 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 RN7SL319P-201ENST00000480656 221 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 AC098583.1-201ENST00000480875 255 ntBASIC5.44□□□□□ -1.54
USP41Q3LFD5 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
USP41Q3LFD5 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms