Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ZFRP1-201ENST00000457579 2970 ntBASIC3.19□□□□□ -1.9
RPL39P62891 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
RPL39P62891 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RPL39P62891 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.19□□□□□ -1.9
RPL39P62891 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
RPL39P62891 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
RPL39P62891 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
RPL39P62891 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.19□□□□□ -1.9
RPL39P62891 AC068254.2-201ENST00000623938 3577 ntBASIC3.18□□□□□ -1.9
RPL39P62891 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
RPL39P62891 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPL39P62891 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RPL39P62891 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPL39P62891 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RPL39P62891 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPL39P62891 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RPL39P62891 ZNF733P-202ENST00000444809 1573 ntBASIC3.18□□□□□ -1.9
RPL39P62891 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPL39P62891 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.18□□□□□ -1.9
RPL39P62891 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPL39P62891 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPL39P62891 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPL39P62891 RN7SKP160-201ENST00000363804 340 ntBASIC3.18□□□□□ -1.9
RPL39P62891 MIR93-201ENST00000385024 80 ntBASIC3.18□□□□□ -1.9
RPL39P62891 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPL39P62891 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
RPL39P62891 HMGB3P7-201ENST00000400214 611 ntBASIC3.18□□□□□ -1.9
RPL39P62891 RPL31-204ENST00000409038 817 ntTSL 2 BASIC3.18□□□□□ -1.9
RPL39P62891 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPL39P62891 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC3.18□□□□□ -1.9
RPL39P62891 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.18□□□□□ -1.9
RPL39P62891 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.18□□□□□ -1.9
RPL39P62891 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.18□□□□□ -1.9
RPL39P62891 UBTFL3-201ENST00000418934 1024 ntBASIC3.18□□□□□ -1.9
RPL39P62891 H2AFZP5-201ENST00000446960 382 ntBASIC3.18□□□□□ -1.9
RPL39P62891 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC3.18□□□□□ -1.9
RPL39P62891 AC092905.1-201ENST00000467527 949 ntBASIC3.18□□□□□ -1.9
RPL39P62891 UBTFL6-201ENST00000477929 1024 ntBASIC3.18□□□□□ -1.9
RPL39P62891 AC072052.1-201ENST00000496556 306 ntBASIC3.18□□□□□ -1.9
RPL39P62891 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.18□□□□□ -1.9
RPL39P62891 AC027026.1-201ENST00000532323 742 ntBASIC3.18□□□□□ -1.9
RPL39P62891 AC069240.1-201ENST00000548774 375 ntBASIC3.18□□□□□ -1.9
RPL39P62891 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC3.18□□□□□ -1.9
RPL39P62891 MIR3614-201ENST00000581261 86 ntBASIC3.18□□□□□ -1.9
RPL39P62891 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.18□□□□□ -1.9
RPL39P62891 AC107993.1-201ENST00000591343 684 ntBASIC3.18□□□□□ -1.9
RPL39P62891 IMMP1LP3-201ENST00000604197 224 ntBASIC3.18□□□□□ -1.9
RPL39P62891 AL160290.3-201ENST00000604869 165 ntBASIC3.18□□□□□ -1.9
RPL39P62891 AL031666.3-201ENST00000609320 1006 ntBASIC3.18□□□□□ -1.9
RPL39P62891 SMCR2_2.1-201ENST00000619783 161 ntBASIC3.18□□□□□ -1.9
RPL39P62891 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.18□□□□□ -1.9
RPL39P62891 AC139769.1-204ENST00000472297 1931 ntBASIC3.18□□□□□ -1.9
RPL39P62891 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.18□□□□□ -1.9
RPL39P62891 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC3.18□□□□□ -1.9
RPL39P62891 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RPL39P62891 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
RPL39P62891 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RPL39P62891 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.18□□□□□ -1.9
RPL39P62891 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPL39P62891 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RPL39P62891 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RPL39P62891 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RPL39P62891 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RPL39P62891 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPL39P62891 AC011266.1-201ENST00000624119 3569 ntBASIC3.17□□□□□ -1.9
RPL39P62891 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPL39P62891 SAMMSON-226ENST00000642089 1582 ntBASIC3.17□□□□□ -1.9
RPL39P62891 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
RPL39P62891 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC3.17□□□□□ -1.9
RPL39P62891 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
RPL39P62891 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.17□□□□□ -1.9
RPL39P62891 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPL39P62891 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RPL39P62891 SNORD74.4-201ENST00000364129 80 ntBASIC3.17□□□□□ -1.9
RPL39P62891 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RPL39P62891 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
RPL39P62891 SNORA17A-201ENST00000391185 133 ntBASIC3.17□□□□□ -1.9
RPL39P62891 VDAC2P1-201ENST00000399358 958 ntBASIC3.17□□□□□ -1.9
RPL39P62891 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPL39P62891 RNA5SP104-201ENST00000410989 118 ntBASIC3.17□□□□□ -1.9
RPL39P62891 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC3.17□□□□□ -1.9
RPL39P62891 AC004552.1-201ENST00000419089 348 ntBASIC3.17□□□□□ -1.9
RPL39P62891 AC062016.2-201ENST00000420950 676 ntBASIC3.17□□□□□ -1.9
RPL39P62891 PRELID3BP10-201ENST00000431957 584 ntBASIC3.17□□□□□ -1.9
RPL39P62891 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
RPL39P62891 AC097523.2-201ENST00000435551 652 ntBASIC3.17□□□□□ -1.9
RPL39P62891 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC3.17□□□□□ -1.9
RPL39P62891 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.17□□□□□ -1.9
RPL39P62891 AL606490.1-201ENST00000452266 765 ntBASIC3.17□□□□□ -1.9
RPL39P62891 AURKAPS2-201ENST00000454983 333 ntBASIC3.17□□□□□ -1.9
RPL39P62891 AC079804.1-201ENST00000461922 436 ntBASIC3.17□□□□□ -1.9
RPL39P62891 RPS26P3-201ENST00000470205 348 ntBASIC3.17□□□□□ -1.9
RPL39P62891 AC090543.2-201ENST00000483963 348 ntBASIC3.17□□□□□ -1.9
RPL39P62891 AC004057.1-201ENST00000485827 348 ntBASIC3.17□□□□□ -1.9
RPL39P62891 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC3.17□□□□□ -1.9
RPL39P62891 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.17□□□□□ -1.9
RPL39P62891 AC006499.6-201ENST00000511169 607 ntBASIC3.17□□□□□ -1.9
RPL39P62891 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.17□□□□□ -1.9
RPL39P62891 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.17□□□□□ -1.9
RPL39P62891 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms