Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKNOX1P55347 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKNOX1P55347 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.69□□□□□ -1.66
PKNOX1P55347 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKNOX1P55347 SNORA70-201ENST00000384436 135 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.69□□□□□ -1.66
PKNOX1P55347 AC104651.2-201ENST00000447549 528 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 RBMY2TP-201ENST00000451162 947 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 RPS18P6-201ENST00000476880 458 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.69□□□□□ -1.66
PKNOX1P55347 ARL4AP1-201ENST00000503220 705 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
PKNOX1P55347 RPS27AP18-201ENST00000515536 459 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PKNOX1P55347 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC4.69□□□□□ -1.66
PKNOX1P55347 AC090022.1-201ENST00000546569 311 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 AL049839.1-201ENST00000556151 657 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 MIR4691-201ENST00000583764 85 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.69□□□□□ -1.66
PKNOX1P55347 MEMO1P5-201ENST00000604810 406 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 AL121932.1-201ENST00000605542 214 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 AC138473.1-201ENST00000605717 526 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 AL008729.2-201ENST00000606393 473 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 CR381572.2-201ENST00000624852 397 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PKNOX1P55347 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKNOX1P55347 AL121950.1-201ENST00000624993 2077 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKNOX1P55347 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKNOX1P55347 AL445487.1-201ENST00000415694 1580 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 RLIMP2-201ENST00000427891 1563 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 DDX18P4-201ENST00000511690 1966 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 SCN1A-220ENST00000641603 12506 ntBASIC4.69□□□□□ -1.66
PKNOX1P55347 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PKNOX1P55347 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PKNOX1P55347 UGT2B26P-201ENST00000508672 1613 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.68□□□□□ -1.66
PKNOX1P55347 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
PKNOX1P55347 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PKNOX1P55347 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PKNOX1P55347 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.68□□□□□ -1.66
PKNOX1P55347 HSPA8P18-201ENST00000439846 1928 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PKNOX1P55347 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.68□□□□□ -1.66
PKNOX1P55347 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.68□□□□□ -1.66
PKNOX1P55347 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PKNOX1P55347 RNU6-1320P-201ENST00000390838 107 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 RNU6-1269P-201ENST00000391139 107 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 AP002530.1-201ENST00000405705 684 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 Z68694.1-201ENST00000413929 841 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 RAB9AP4-201ENST00000415230 609 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.68□□□□□ -1.66
PKNOX1P55347 BMS1P13-201ENST00000417301 885 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 AC005033.1-201ENST00000428904 813 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 RPS17P8-201ENST00000434525 335 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 HMGB3P10-201ENST00000434734 572 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 RHOT1P3-201ENST00000436571 331 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.68□□□□□ -1.66
PKNOX1P55347 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.68□□□□□ -1.66
PKNOX1P55347 RPL12P11-201ENST00000439970 501 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.68□□□□□ -1.66
PKNOX1P55347 RNU6-599P-201ENST00000459383 107 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 RNU6-1193P-201ENST00000459461 107 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 AC107015.1-201ENST00000466902 747 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PKNOX1P55347 AC090114.3-201ENST00000479267 829 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 HIGD1AP14-201ENST00000507617 282 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 AC021146.3-201ENST00000511911 260 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 RPL7L1P4-201ENST00000513004 707 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 TCP11X3P-202ENST00000514289 1254 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.68□□□□□ -1.66
PKNOX1P55347 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.68□□□□□ -1.66
PKNOX1P55347 AC079075.1-201ENST00000559543 878 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.68□□□□□ -1.66
PKNOX1P55347 AC007225.2-201ENST00000562529 256 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 OR7M1P-201ENST00000608946 533 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 AC093799.2-201ENST00000610062 578 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 AL022401.1-201ENST00000619498 108 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 RNU6-368P-201ENST00000620928 107 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 RNU6-538P-201ENST00000622329 107 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.68□□□□□ -1.66
PKNOX1P55347 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PKNOX1P55347 BRAFP1-201ENST00000445336 2703 ntBASIC4.68□□□□□ -1.66
PKNOX1P55347 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PKNOX1P55347 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PKNOX1P55347 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.68□□□□□ -1.66
PKNOX1P55347 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PKNOX1P55347 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PKNOX1P55347 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PKNOX1P55347 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
PKNOX1P55347 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.68□□□□□ -1.66
PKNOX1P55347 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
PKNOX1P55347 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PKNOX1P55347 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PKNOX1P55347 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.67□□□□□ -1.66
PKNOX1P55347 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
PKNOX1P55347 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
PKNOX1P55347 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PKNOX1P55347 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms