Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 AC023141.9-201ENST00000458734 412 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC6.26□□□□□ -1.41
EPHB3P54753 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.26□□□□□ -1.41
EPHB3P54753 CCDC11P1-201ENST00000503137 1162 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 MYL12BP2-201ENST00000503948 512 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 AC112198.1-201ENST00000505369 1220 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.26□□□□□ -1.41
EPHB3P54753 AC116347.2-201ENST00000514912 523 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
EPHB3P54753 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.26□□□□□ -1.41
EPHB3P54753 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC6.26□□□□□ -1.41
EPHB3P54753 AL139174.1-201ENST00000531489 886 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC6.26□□□□□ -1.41
EPHB3P54753 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.26□□□□□ -1.41
EPHB3P54753 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.26□□□□□ -1.41
EPHB3P54753 ZNF519P3-201ENST00000557158 1032 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC6.26□□□□□ -1.41
EPHB3P54753 AC093524.1-201ENST00000564266 1094 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.26□□□□□ -1.41
EPHB3P54753 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.26□□□□□ -1.41
EPHB3P54753 ELOCP34-201ENST00000604436 327 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 AL592221.1-201ENST00000605266 382 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 RNU4-89P-201ENST00000607443 133 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 AC019131.2-201ENST00000609071 870 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 AC007684.1-201ENST00000609671 477 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 AC109309.2-201ENST00000612597 332 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 MIR6886-201ENST00000619864 61 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC6.26□□□□□ -1.41
EPHB3P54753 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC6.26□□□□□ -1.41
EPHB3P54753 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.26□□□□□ -1.41
EPHB3P54753 MIR193BHG-214ENST00000641765 509 ntBASIC6.26□□□□□ -1.41
EPHB3P54753 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
EPHB3P54753 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.26□□□□□ -1.41
EPHB3P54753 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.26□□□□□ -1.41
EPHB3P54753 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.26□□□□□ -1.41
EPHB3P54753 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.26□□□□□ -1.41
EPHB3P54753 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
EPHB3P54753 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.25□□□□□ -1.41
EPHB3P54753 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
EPHB3P54753 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
EPHB3P54753 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
EPHB3P54753 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
EPHB3P54753 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.25□□□□□ -1.41
EPHB3P54753 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
EPHB3P54753 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
EPHB3P54753 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
EPHB3P54753 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
EPHB3P54753 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
EPHB3P54753 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
EPHB3P54753 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
EPHB3P54753 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.25□□□□□ -1.41
EPHB3P54753 AC007899.1-201ENST00000412776 775 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC6.25□□□□□ -1.41
EPHB3P54753 TRBV24OR9-2-201ENST00000416632 435 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 AC079355.1-201ENST00000421770 223 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 C1DP1-201ENST00000426049 402 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 AC079922.1-201ENST00000443291 359 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 DNAJC19P5-201ENST00000443295 316 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 MTCYBP42-201ENST00000444653 1130 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 AC007327.1-201ENST00000447461 264 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.25□□□□□ -1.41
EPHB3P54753 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC6.25□□□□□ -1.41
EPHB3P54753 RPL7L1P3-201ENST00000455249 689 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 RPS27AP2-201ENST00000457576 465 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.25□□□□□ -1.41
EPHB3P54753 SETP11-201ENST00000473027 690 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 RN7SL165P-201ENST00000477476 291 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 HMGB1P36-201ENST00000487709 576 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC6.25□□□□□ -1.41
EPHB3P54753 AC004069.2-201ENST00000505438 1114 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 PRDX4P1-201ENST00000507189 574 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.25□□□□□ -1.41
EPHB3P54753 SNORA81.2-201ENST00000516868 170 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.25□□□□□ -1.41
EPHB3P54753 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC6.25□□□□□ -1.41
EPHB3P54753 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.25□□□□□ -1.41
EPHB3P54753 NAP1L1P1-201ENST00000524793 1063 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC6.25□□□□□ -1.41
EPHB3P54753 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.25□□□□□ -1.41
EPHB3P54753 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC6.25□□□□□ -1.41
EPHB3P54753 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.25□□□□□ -1.41
EPHB3P54753 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC6.25□□□□□ -1.41
EPHB3P54753 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.25□□□□□ -1.41
EPHB3P54753 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC6.25□□□□□ -1.41
EPHB3P54753 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC6.25□□□□□ -1.41
EPHB3P54753 AC009101.1-201ENST00000568135 242 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.25□□□□□ -1.41
EPHB3P54753 MIR4999-201ENST00000585029 91 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.25□□□□□ -1.41
EPHB3P54753 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
EPHB3P54753 AC011497.2-201ENST00000600255 639 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 AP004372.1-201ENST00000604842 844 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 AC096553.1-201ENST00000605169 829 ntBASIC6.25□□□□□ -1.41
EPHB3P54753 RPL12P48-201ENST00000605620 304 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms