Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
BRCA2P51587 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.9□□□□□ -1.63
BRCA2P51587 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRCA2P51587 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BRCA2P51587 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRCA2P51587 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.89□□□□□ -1.63
BRCA2P51587 ATP5F1P4-201ENST00000397288 746 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 RNA5SP36-201ENST00000410197 133 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 BX679664.2-201ENST00000439282 283 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 AL359265.1-201ENST00000440296 795 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 AL591363.1-201ENST00000450091 483 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.89□□□□□ -1.63
BRCA2P51587 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.89□□□□□ -1.63
BRCA2P51587 MIR5685-201ENST00000579080 79 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 MIMT1-201ENST00000597105 1050 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRCA2P51587 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRCA2P51587 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRCA2P51587 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.89□□□□□ -1.63
BRCA2P51587 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.89□□□□□ -1.63
BRCA2P51587 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRCA2P51587 SHROOM4-203ENST00000460112 8919 ntTSL 5 BASIC4.89□□□□□ -1.63
BRCA2P51587 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BRCA2P51587 LRP1-201ENST00000243077 14897 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRCA2P51587 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRCA2P51587 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRCA2P51587 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRCA2P51587 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
BRCA2P51587 MIR331-201ENST00000362302 94 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 MIR1289-1-201ENST00000408836 144 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 RPL7P2-201ENST00000427639 268 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 RPS20P21-201ENST00000466859 343 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 RN7SL293P-201ENST00000481765 281 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 PAICSP4-201ENST00000517543 1253 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 FKBP1BP1-201ENST00000553366 325 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC4.89□□□□□ -1.63
BRCA2P51587 AL450472.3-201ENST00000615578 367 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.89□□□□□ -1.63
BRCA2P51587 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRCA2P51587 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.89□□□□□ -1.63
BRCA2P51587 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.89□□□□□ -1.63
BRCA2P51587 WNK3-203ENST00000375169 11172 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
BRCA2P51587 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
BRCA2P51587 LINC00622-201ENST00000562811 1570 ntBASIC4.88□□□□□ -1.63
BRCA2P51587 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
BRCA2P51587 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.88□□□□□ -1.63
BRCA2P51587 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 RN7SKP235-201ENST00000410662 305 ntBASIC4.88□□□□□ -1.63
BRCA2P51587 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.88□□□□□ -1.63
BRCA2P51587 AC099670.2-201ENST00000435130 321 ntBASIC4.88□□□□□ -1.63
BRCA2P51587 PPIAP3-201ENST00000450588 505 ntBASIC4.88□□□□□ -1.63
BRCA2P51587 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.88□□□□□ -1.63
BRCA2P51587 RN7SKP157-201ENST00000516174 282 ntBASIC4.88□□□□□ -1.63
BRCA2P51587 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.88□□□□□ -1.63
BRCA2P51587 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.88□□□□□ -1.63
BRCA2P51587 METTL2B-204ENST00000480046 5743 ntTSL 2 BASIC4.88□□□□□ -1.63
BRCA2P51587 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
BRCA2P51587 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.88□□□□□ -1.63
BRCA2P51587 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
BRCA2P51587 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
BRCA2P51587 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 DIS3-201ENST00000377767 10604 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC4.88□□□□□ -1.63
BRCA2P51587 PPIAP15-201ENST00000479662 484 ntBASIC4.88□□□□□ -1.63
BRCA2P51587 AC136777.2-201ENST00000522979 358 ntBASIC4.88□□□□□ -1.63
BRCA2P51587 uc_338.13-201ENST00000618243 179 ntBASIC4.88□□□□□ -1.63
BRCA2P51587 MIR3651-201ENST00000630427 90 ntBASIC4.88□□□□□ -1.63
BRCA2P51587 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.88□□□□□ -1.63
BRCA2P51587 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 MAPK8-205ENST00000374182 5638 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 ATXN3-216ENST00000545170 6950 ntTSL 5 BASIC4.88□□□□□ -1.63
BRCA2P51587 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
BRCA2P51587 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 AC106871.1-201ENST00000568324 3102 ntBASIC4.88□□□□□ -1.63
BRCA2P51587 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 NPM1P36-201ENST00000415681 835 ntBASIC4.88□□□□□ -1.63
BRCA2P51587 AL157831.1-201ENST00000426134 473 ntBASIC4.88□□□□□ -1.63
BRCA2P51587 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.88□□□□□ -1.63
BRCA2P51587 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC4.88□□□□□ -1.63
BRCA2P51587 AC104651.2-201ENST00000447549 528 ntBASIC4.88□□□□□ -1.63
BRCA2P51587 EIF2S2P5-201ENST00000457635 968 ntBASIC4.88□□□□□ -1.63
BRCA2P51587 AC104849.1-201ENST00000462623 405 ntBASIC4.88□□□□□ -1.63
BRCA2P51587 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.88□□□□□ -1.63
BRCA2P51587 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.88□□□□□ -1.63
BRCA2P51587 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
BRCA2P51587 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.88□□□□□ -1.63
BRCA2P51587 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
BRCA2P51587 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.88□□□□□ -1.63
BRCA2P51587 LTBP1-204ENST00000407925 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.88□□□□□ -1.63
BRCA2P51587 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
BRCA2P51587 TET1P1-201ENST00000426627 2301 ntBASIC4.87□□□□□ -1.63
BRCA2P51587 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms