Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 RPL31P44-201ENST00000447680 377 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 YRDCP3-201ENST00000456507 480 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 RPL7P40-201ENST00000481703 745 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 RN7SL809P-201ENST00000482040 297 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX2-1P43699 RPL15P21-201ENST00000495592 567 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 LSM3P4-201ENST00000502948 309 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX2-1P43699 AC118282.1-201ENST00000506408 765 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX2-1P43699 AL671862.1-201ENST00000515851 349 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 RN7SKP238-201ENST00000516483 249 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 IGKV3D-25-201ENST00000519599 235 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX2-1P43699 AC010376.1-201ENST00000522101 334 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.39□□□□□ -1.71
NKX2-1P43699 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.39□□□□□ -1.71
NKX2-1P43699 AC068993.1-201ENST00000546724 589 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.39□□□□□ -1.71
NKX2-1P43699 AP005403.1-201ENST00000579720 229 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX2-1P43699 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 AC008507.2-201ENST00000588402 1176 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.39□□□□□ -1.71
NKX2-1P43699 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC4.39□□□□□ -1.71
NKX2-1P43699 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX2-1P43699 AC025574.2-201ENST00000615621 514 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 AL669942.2-201ENST00000620352 697 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX2-1P43699 AP000648.2-201ENST00000624182 404 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 AC073592.6-201ENST00000624271 415 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 AC090506.2-201ENST00000624521 419 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 AL390318.1-201ENST00000624564 687 ntBASIC4.39□□□□□ -1.71
NKX2-1P43699 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX2-1P43699 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX2-1P43699 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NKX2-1P43699 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.39□□□□□ -1.71
NKX2-1P43699 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
NKX2-1P43699 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.39□□□□□ -1.71
NKX2-1P43699 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NKX2-1P43699 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
NKX2-1P43699 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
NKX2-1P43699 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.39□□□□□ -1.71
NKX2-1P43699 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
NKX2-1P43699 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-1P43699 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-1P43699 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 PHKBP1-201ENST00000450951 1951 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-1P43699 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-1P43699 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX2-1P43699 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-1P43699 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-1P43699 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 RNU5E-10P-201ENST00000363506 118 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 RNU1-65P-201ENST00000363919 148 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 RNU6-207P-201ENST00000384137 107 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 LINC01881-201ENST00000416103 412 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AC009302.1-201ENST00000417147 390 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AL022331.1-201ENST00000429025 477 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.38□□□□□ -1.71
NKX2-1P43699 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
NKX2-1P43699 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AC011242.1-201ENST00000433596 1158 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 VN1R110P-201ENST00000438988 971 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AL591363.1-201ENST00000450091 483 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 RPL10P17-201ENST00000453852 316 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX2-1P43699 snoU109.3-201ENST00000459477 145 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AC104339.1-201ENST00000465478 348 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AC104982.1-201ENST00000478775 574 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AC087672.1-201ENST00000479876 766 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 METTL15P1-201ENST00000481421 1045 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AC022215.1-201ENST00000481770 362 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 RPS3AP15-201ENST00000483874 781 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC4.38□□□□□ -1.71
NKX2-1P43699 AC104115.2-201ENST00000523026 687 ntBASIC4.38□□□□□ -1.71
NKX2-1P43699 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms