Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CKS2P33552 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CKS2P33552 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.39□□□□□ -1.87
CKS2P33552 EEF1A1P36-201ENST00000427807 1351 ntBASIC3.39□□□□□ -1.87
CKS2P33552 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.39□□□□□ -1.87
CKS2P33552 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CKS2P33552 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
CKS2P33552 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CKS2P33552 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CKS2P33552 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CKS2P33552 SNORA17.1-201ENST00000362945 126 ntBASIC3.39□□□□□ -1.87
CKS2P33552 RNA5SP428-201ENST00000365129 132 ntBASIC3.39□□□□□ -1.87
CKS2P33552 RHOT1P2-201ENST00000366423 333 ntBASIC3.39□□□□□ -1.87
CKS2P33552 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CKS2P33552 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CKS2P33552 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CKS2P33552 RNU6-729P-201ENST00000384399 107 ntBASIC3.39□□□□□ -1.87
CKS2P33552 RNU6-1320P-201ENST00000390838 107 ntBASIC3.39□□□□□ -1.87
CKS2P33552 RNU6-1269P-201ENST00000391139 107 ntBASIC3.39□□□□□ -1.87
CKS2P33552 AL645733.1-201ENST00000402250 217 ntBASIC3.39□□□□□ -1.87
CKS2P33552 NFU1P1-201ENST00000413128 774 ntBASIC3.39□□□□□ -1.87
CKS2P33552 AF186996.5-201ENST00000418098 904 ntBASIC3.39□□□□□ -1.87
CKS2P33552 LINC00993-201ENST00000420453 540 ntBASIC3.39□□□□□ -1.87
CKS2P33552 SKP1P3-201ENST00000429280 487 ntBASIC3.39□□□□□ -1.87
CKS2P33552 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC3.39□□□□□ -1.87
CKS2P33552 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.39□□□□□ -1.87
CKS2P33552 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.39□□□□□ -1.87
CKS2P33552 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC3.39□□□□□ -1.87
CKS2P33552 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.39□□□□□ -1.87
CKS2P33552 AL137845.2-201ENST00000444292 988 ntBASIC3.39□□□□□ -1.87
CKS2P33552 GEMIN8P3-201ENST00000445417 720 ntBASIC3.39□□□□□ -1.87
CKS2P33552 FGF7P3-201ENST00000454645 303 ntBASIC3.39□□□□□ -1.87
CKS2P33552 RNU6-599P-201ENST00000459383 107 ntBASIC3.39□□□□□ -1.87
CKS2P33552 RNU6-1193P-201ENST00000459461 107 ntBASIC3.39□□□□□ -1.87
CKS2P33552 RN7SL319P-201ENST00000480656 221 ntBASIC3.39□□□□□ -1.87
CKS2P33552 AC090013.1-201ENST00000485147 480 ntBASIC3.39□□□□□ -1.87
CKS2P33552 RN7SL547P-201ENST00000490793 290 ntBASIC3.39□□□□□ -1.87
CKS2P33552 AC025164.1-201ENST00000496249 478 ntBASIC3.39□□□□□ -1.87
CKS2P33552 RN7SL612P-201ENST00000497704 295 ntBASIC3.39□□□□□ -1.87
CKS2P33552 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC3.39□□□□□ -1.87
CKS2P33552 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.39□□□□□ -1.87
CKS2P33552 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC3.39□□□□□ -1.87
CKS2P33552 AC015795.1-201ENST00000513669 327 ntBASIC3.39□□□□□ -1.87
CKS2P33552 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.39□□□□□ -1.87
CKS2P33552 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC3.39□□□□□ -1.87
CKS2P33552 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC3.39□□□□□ -1.87
CKS2P33552 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CKS2P33552 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC3.39□□□□□ -1.87
CKS2P33552 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC3.39□□□□□ -1.87
CKS2P33552 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC3.39□□□□□ -1.87
CKS2P33552 OR1AB1P-201ENST00000585564 761 ntBASIC3.39□□□□□ -1.87
CKS2P33552 MRO-208ENST00000588444 866 ntTSL 3 BASIC3.39□□□□□ -1.87
CKS2P33552 AC008638.3-201ENST00000603341 463 ntBASIC3.39□□□□□ -1.87
CKS2P33552 AL356752.1-201ENST00000615844 593 ntBASIC3.39□□□□□ -1.87
CKS2P33552 RNU6-368P-201ENST00000620928 107 ntBASIC3.39□□□□□ -1.87
CKS2P33552 RNU6-538P-201ENST00000622329 107 ntBASIC3.39□□□□□ -1.87
CKS2P33552 AC099494.2-201ENST00000623371 978 ntBASIC3.39□□□□□ -1.87
CKS2P33552 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CKS2P33552 AC011493.1-201ENST00000596753 1632 ntBASIC3.39□□□□□ -1.87
CKS2P33552 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CKS2P33552 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CKS2P33552 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.39□□□□□ -1.87
CKS2P33552 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CKS2P33552 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CKS2P33552 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CKS2P33552 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CKS2P33552 Z82217.1-201ENST00000625157 8149 ntBASIC3.38□□□□□ -1.87
CKS2P33552 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CKS2P33552 MTND4P26-201ENST00000415971 1359 ntBASIC3.38□□□□□ -1.87
CKS2P33552 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CKS2P33552 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CKS2P33552 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.38□□□□□ -1.87
CKS2P33552 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS2P33552 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CKS2P33552 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CKS2P33552 RNU1-15P-201ENST00000353977 144 ntBASIC3.38□□□□□ -1.87
CKS2P33552 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CKS2P33552 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CKS2P33552 MIR93-201ENST00000385024 80 ntBASIC3.38□□□□□ -1.87
CKS2P33552 AC009804.1-201ENST00000400949 179 ntBASIC3.38□□□□□ -1.87
CKS2P33552 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC3.38□□□□□ -1.87
CKS2P33552 ATP6V1G1P7-201ENST00000415853 349 ntBASIC3.38□□□□□ -1.87
CKS2P33552 UBTFL3-201ENST00000418934 1024 ntBASIC3.38□□□□□ -1.87
CKS2P33552 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS2P33552 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS2P33552 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC3.38□□□□□ -1.87
CKS2P33552 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS2P33552 YWHAEP1-201ENST00000453697 763 ntBASIC3.38□□□□□ -1.87
CKS2P33552 AC107015.1-201ENST00000466902 747 ntBASIC3.38□□□□□ -1.87
CKS2P33552 UBTFL6-201ENST00000477929 1024 ntBASIC3.38□□□□□ -1.87
CKS2P33552 HMGN2P25-201ENST00000486956 268 ntBASIC3.38□□□□□ -1.87
CKS2P33552 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS2P33552 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC3.38□□□□□ -1.87
CKS2P33552 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.38□□□□□ -1.87
CKS2P33552 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CKS2P33552 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.38□□□□□ -1.87
CKS2P33552 RNA5SP43-201ENST00000516559 110 ntBASIC3.38□□□□□ -1.87
CKS2P33552 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC3.38□□□□□ -1.87
CKS2P33552 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC3.38□□□□□ -1.87
CKS2P33552 AC069240.1-201ENST00000548774 375 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms