Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC211433.2-201ENST00000608433 387 ntBASIC4.54□□□□□ -1.68
SHC1P29353 MIR7155-201ENST00000615925 56 ntBASIC4.54□□□□□ -1.68
SHC1P29353 AC090510.2-201ENST00000617465 629 ntBASIC4.54□□□□□ -1.68
SHC1P29353 AP002799.1-201ENST00000623552 423 ntBASIC4.54□□□□□ -1.68
SHC1P29353 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.54□□□□□ -1.68
SHC1P29353 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.54□□□□□ -1.68
SHC1P29353 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SHC1P29353 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
SHC1P29353 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.54□□□□□ -1.68
SHC1P29353 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SHC1P29353 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SHC1P29353 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.54□□□□□ -1.68
SHC1P29353 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
SHC1P29353 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
SHC1P29353 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHC1P29353 AC133552.1-201ENST00000569988 4007 ntBASIC4.54□□□□□ -1.68
SHC1P29353 AC007342.5-201ENST00000571340 2142 ntBASIC4.54□□□□□ -1.68
SHC1P29353 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHC1P29353 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHC1P29353 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SHC1P29353 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC4.54□□□□□ -1.68
SHC1P29353 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.53□□□□□ -1.68
SHC1P29353 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.53□□□□□ -1.68
SHC1P29353 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.53□□□□□ -1.68
SHC1P29353 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SHC1P29353 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 HSPA8P18-201ENST00000439846 1928 ntBASIC4.53□□□□□ -1.68
SHC1P29353 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 RN7SKP104-201ENST00000362605 328 ntBASIC4.53□□□□□ -1.68
SHC1P29353 RNA5SP305-201ENST00000362665 119 ntBASIC4.53□□□□□ -1.68
SHC1P29353 RNU6-883P-201ENST00000384597 107 ntBASIC4.53□□□□□ -1.68
SHC1P29353 AL645927.1-201ENST00000396783 406 ntBASIC4.53□□□□□ -1.68
SHC1P29353 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
SHC1P29353 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.53□□□□□ -1.68
SHC1P29353 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.53□□□□□ -1.68
SHC1P29353 COX6CP13-201ENST00000428703 226 ntBASIC4.53□□□□□ -1.68
SHC1P29353 RPS26P4-201ENST00000431743 355 ntBASIC4.53□□□□□ -1.68
SHC1P29353 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.53□□□□□ -1.68
SHC1P29353 SNRPFP2-201ENST00000440710 251 ntBASIC4.53□□□□□ -1.68
SHC1P29353 TXNP5-201ENST00000441043 315 ntBASIC4.53□□□□□ -1.68
SHC1P29353 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.53□□□□□ -1.68
SHC1P29353 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 AC018635.1-201ENST00000468292 1030 ntBASIC4.53□□□□□ -1.68
SHC1P29353 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC4.53□□□□□ -1.68
SHC1P29353 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.53□□□□□ -1.68
SHC1P29353 OR11I1P-201ENST00000486033 954 ntBASIC4.53□□□□□ -1.68
SHC1P29353 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.53□□□□□ -1.68
SHC1P29353 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.53□□□□□ -1.68
SHC1P29353 NDUFA5P12-201ENST00000503796 343 ntBASIC4.53□□□□□ -1.68
SHC1P29353 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC4.53□□□□□ -1.68
SHC1P29353 RNA5SP249-201ENST00000516127 99 ntBASIC4.53□□□□□ -1.68
SHC1P29353 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.53□□□□□ -1.68
SHC1P29353 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC4.53□□□□□ -1.68
SHC1P29353 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC4.53□□□□□ -1.68
SHC1P29353 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.53□□□□□ -1.68
SHC1P29353 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.53□□□□□ -1.68
SHC1P29353 EIF1P5-201ENST00000585002 234 ntBASIC4.53□□□□□ -1.68
SHC1P29353 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.53□□□□□ -1.68
SHC1P29353 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 VN1R81P-201ENST00000602085 372 ntBASIC4.53□□□□□ -1.68
SHC1P29353 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.53□□□□□ -1.68
SHC1P29353 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.53□□□□□ -1.68
SHC1P29353 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC4.53□□□□□ -1.68
SHC1P29353 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
SHC1P29353 AL356490.1-201ENST00000623079 479 ntBASIC4.53□□□□□ -1.68
SHC1P29353 AC009452.1-201ENST00000640823 606 ntBASIC4.53□□□□□ -1.68
SHC1P29353 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.53□□□□□ -1.68
SHC1P29353 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.53□□□□□ -1.68
SHC1P29353 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SHC1P29353 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.69
SHC1P29353 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.53□□□□□ -1.69
SHC1P29353 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.53□□□□□ -1.69
SHC1P29353 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHC1P29353 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
SHC1P29353 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHC1P29353 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHC1P29353 SCARNA15-201ENST00000607520 4325 ntBASIC4.52□□□□□ -1.69
SHC1P29353 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHC1P29353 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHC1P29353 MTND5P23-201ENST00000430812 1655 ntBASIC4.52□□□□□ -1.69
SHC1P29353 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHC1P29353 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHC1P29353 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
SHC1P29353 RNA5SP123-201ENST00000363244 119 ntBASIC4.52□□□□□ -1.69
SHC1P29353 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
SHC1P29353 OR13Z1P-201ENST00000416141 834 ntBASIC4.52□□□□□ -1.69
SHC1P29353 AL357078.2-201ENST00000416486 427 ntBASIC4.52□□□□□ -1.69
SHC1P29353 AC007394.1-201ENST00000421941 531 ntBASIC4.52□□□□□ -1.69
SHC1P29353 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 896 ms