Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AC114755.5-201ENST00000447760 831 ntBASIC4.56□□□□□ -1.68
COL5A1P20908 AC108463.1-201ENST00000450258 347 ntBASIC4.56□□□□□ -1.68
COL5A1P20908 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.56□□□□□ -1.68
COL5A1P20908 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
COL5A1P20908 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC4.56□□□□□ -1.68
COL5A1P20908 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC4.56□□□□□ -1.68
COL5A1P20908 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.56□□□□□ -1.68
COL5A1P20908 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.56□□□□□ -1.68
COL5A1P20908 SNORA74C-1-201ENST00000580726 201 ntBASIC4.56□□□□□ -1.68
COL5A1P20908 AL035461.2-201ENST00000619201 524 ntBASIC4.56□□□□□ -1.68
COL5A1P20908 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
COL5A1P20908 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL5A1P20908 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
COL5A1P20908 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
COL5A1P20908 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL5A1P20908 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.55□□□□□ -1.68
COL5A1P20908 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL5A1P20908 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.55□□□□□ -1.68
COL5A1P20908 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL5A1P20908 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL5A1P20908 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL5A1P20908 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL5A1P20908 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
COL5A1P20908 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL5A1P20908 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
COL5A1P20908 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
COL5A1P20908 OR1F12-201ENST00000402365 945 ntBASIC4.55□□□□□ -1.68
COL5A1P20908 ARL4AP5-201ENST00000404372 599 ntBASIC4.55□□□□□ -1.68
COL5A1P20908 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.55□□□□□ -1.68
COL5A1P20908 FHP1-201ENST00000442741 703 ntBASIC4.55□□□□□ -1.68
COL5A1P20908 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.55□□□□□ -1.68
COL5A1P20908 MTND4LP2-201ENST00000502312 285 ntBASIC4.55□□□□□ -1.68
COL5A1P20908 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.55□□□□□ -1.68
COL5A1P20908 SAP18P1-201ENST00000512058 390 ntBASIC4.55□□□□□ -1.68
COL5A1P20908 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.55□□□□□ -1.68
COL5A1P20908 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.55□□□□□ -1.68
COL5A1P20908 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.55□□□□□ -1.68
COL5A1P20908 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.55□□□□□ -1.68
COL5A1P20908 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.55□□□□□ -1.68
COL5A1P20908 AC090948.1-201ENST00000607464 549 ntBASIC4.55□□□□□ -1.68
COL5A1P20908 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.55□□□□□ -1.68
COL5A1P20908 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL5A1P20908 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.55□□□□□ -1.68
COL5A1P20908 AC083837.1-201ENST00000565297 2994 ntBASIC4.55□□□□□ -1.68
COL5A1P20908 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A1P20908 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
COL5A1P20908 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC4.54□□□□□ -1.68
COL5A1P20908 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.54□□□□□ -1.68
COL5A1P20908 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
COL5A1P20908 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.54□□□□□ -1.68
COL5A1P20908 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.54□□□□□ -1.68
COL5A1P20908 RGS17P1-201ENST00000423358 553 ntBASIC4.54□□□□□ -1.68
COL5A1P20908 AL451139.1-201ENST00000434718 346 ntBASIC4.54□□□□□ -1.68
COL5A1P20908 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.54□□□□□ -1.68
COL5A1P20908 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.54□□□□□ -1.68
COL5A1P20908 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.54□□□□□ -1.68
COL5A1P20908 SNRPCP3-201ENST00000474888 476 ntBASIC4.54□□□□□ -1.68
COL5A1P20908 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.54□□□□□ -1.68
COL5A1P20908 NPM1P28-201ENST00000492269 840 ntBASIC4.54□□□□□ -1.68
COL5A1P20908 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A1P20908 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC4.54□□□□□ -1.68
COL5A1P20908 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.54□□□□□ -1.68
COL5A1P20908 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.54□□□□□ -1.68
COL5A1P20908 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC4.54□□□□□ -1.68
COL5A1P20908 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.54□□□□□ -1.68
COL5A1P20908 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A1P20908 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.54□□□□□ -1.68
COL5A1P20908 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A1P20908 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A1P20908 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC4.54□□□□□ -1.68
COL5A1P20908 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A1P20908 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
COL5A1P20908 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A1P20908 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
COL5A1P20908 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A1P20908 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
COL5A1P20908 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A1P20908 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A1P20908 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
COL5A1P20908 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.54□□□□□ -1.68
COL5A1P20908 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL5A1P20908 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL5A1P20908 ST13P16-201ENST00000401760 781 ntBASIC4.53□□□□□ -1.68
COL5A1P20908 RPL23AP83-201ENST00000434984 473 ntBASIC4.53□□□□□ -1.68
COL5A1P20908 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL5A1P20908 AL157385.1-201ENST00000446973 268 ntBASIC4.53□□□□□ -1.68
COL5A1P20908 AC020890.1-201ENST00000491837 504 ntBASIC4.53□□□□□ -1.68
COL5A1P20908 AC105031.1-201ENST00000518550 476 ntBASIC4.53□□□□□ -1.68
COL5A1P20908 MRPL49P2-201ENST00000521066 465 ntBASIC4.53□□□□□ -1.68
COL5A1P20908 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.53□□□□□ -1.68
COL5A1P20908 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
COL5A1P20908 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.53□□□□□ -1.68
COL5A1P20908 AP005901.4-201ENST00000577336 569 ntBASIC4.53□□□□□ -1.68
COL5A1P20908 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL5A1P20908 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.53□□□□□ -1.68
COL5A1P20908 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.53□□□□□ -1.68
COL5A1P20908 AL121950.1-201ENST00000624993 2077 ntBASIC4.53□□□□□ -1.68
COL5A1P20908 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
COL5A1P20908 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
COL5A1P20908 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms