Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PCNAP12004 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.19□□□□□ -1.58
PCNAP12004 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.19□□□□□ -1.58
PCNAP12004 SRSF1P1-201ENST00000424058 520 ntBASIC5.19□□□□□ -1.58
PCNAP12004 MTCO1P43-201ENST00000431831 488 ntBASIC5.19□□□□□ -1.58
PCNAP12004 RPS27P5-201ENST00000444247 244 ntBASIC5.19□□□□□ -1.58
PCNAP12004 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.19□□□□□ -1.58
PCNAP12004 AC012512.1-201ENST00000446594 718 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AC105399.1-202ENST00000447303 205 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AL672138.1-201ENST00000450604 1015 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.19□□□□□ -1.58
PCNAP12004 HSPE1P22-201ENST00000456856 327 ntBASIC5.19□□□□□ -1.58
PCNAP12004 RN7SL423P-201ENST00000486202 304 ntBASIC5.19□□□□□ -1.58
PCNAP12004 PPIAP19-201ENST00000486414 492 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AC090638.1-201ENST00000498296 909 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.19□□□□□ -1.58
PCNAP12004 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.19□□□□□ -1.58
PCNAP12004 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.19□□□□□ -1.58
PCNAP12004 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC5.19□□□□□ -1.58
PCNAP12004 MTATP6P1-201ENST00000514057 681 ntBASIC5.19□□□□□ -1.58
PCNAP12004 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.19□□□□□ -1.58
PCNAP12004 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.19□□□□□ -1.58
PCNAP12004 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.19□□□□□ -1.58
PCNAP12004 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.19□□□□□ -1.58
PCNAP12004 AP000916.1-201ENST00000533869 835 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.19□□□□□ -1.58
PCNAP12004 AC022404.1-201ENST00000555320 273 ntBASIC5.19□□□□□ -1.58
PCNAP12004 YWHAZP1-201ENST00000556286 722 ntBASIC5.19□□□□□ -1.58
PCNAP12004 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.19□□□□□ -1.58
PCNAP12004 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.19□□□□□ -1.58
PCNAP12004 AC023825.1-201ENST00000566704 1030 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AC015720.2-201ENST00000567709 334 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC5.19□□□□□ -1.58
PCNAP12004 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.19□□□□□ -1.58
PCNAP12004 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.19□□□□□ -1.58
PCNAP12004 AC034236.3-201ENST00000605999 461 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AC021851.1-201ENST00000608537 1082 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AC008759.3-201ENST00000613300 508 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC5.19□□□□□ -1.58
PCNAP12004 AL050303.3-201ENST00000613704 284 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AC126175.1-201ENST00000617041 758 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AL356274.1-201ENST00000617064 410 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.19□□□□□ -1.58
PCNAP12004 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AP002967.1-201ENST00000624203 539 ntBASIC5.19□□□□□ -1.58
PCNAP12004 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCNAP12004 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.19□□□□□ -1.58
PCNAP12004 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
PCNAP12004 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PCNAP12004 AC007342.7-201ENST00000624610 2337 ntBASIC5.19□□□□□ -1.58
PCNAP12004 AC008432.1-201ENST00000615912 1320 ntBASIC5.19□□□□□ -1.58
PCNAP12004 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.19□□□□□ -1.58
PCNAP12004 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.19□□□□□ -1.58
PCNAP12004 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PCNAP12004 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCNAP12004 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.19□□□□□ -1.58
PCNAP12004 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PCNAP12004 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.19□□□□□ -1.58
PCNAP12004 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.18□□□□□ -1.58
PCNAP12004 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCNAP12004 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCNAP12004 AL450326.2-201ENST00000421913 1962 ntBASIC5.18□□□□□ -1.58
PCNAP12004 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PCNAP12004 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCNAP12004 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PCNAP12004 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCNAP12004 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCNAP12004 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.18□□□□□ -1.58
PCNAP12004 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.18□□□□□ -1.58
PCNAP12004 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
PCNAP12004 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCNAP12004 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
PCNAP12004 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PCNAP12004 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
PCNAP12004 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PCNAP12004 HSPA8P15-201ENST00000401676 786 ntBASIC5.18□□□□□ -1.58
PCNAP12004 AL133388.1-201ENST00000404509 287 ntBASIC5.18□□□□□ -1.58
PCNAP12004 RNA5SP178-201ENST00000410380 128 ntBASIC5.18□□□□□ -1.58
PCNAP12004 RNU4-74P-201ENST00000411280 161 ntBASIC5.18□□□□□ -1.58
PCNAP12004 CTSL3P-202ENST00000412179 788 ntBASIC5.18□□□□□ -1.58
PCNAP12004 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.18□□□□□ -1.58
PCNAP12004 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.18□□□□□ -1.58
PCNAP12004 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC5.18□□□□□ -1.58
PCNAP12004 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.18□□□□□ -1.58
PCNAP12004 GAPDHP34-201ENST00000432112 823 ntBASIC5.18□□□□□ -1.58
PCNAP12004 AC090018.1-201ENST00000434369 367 ntBASIC5.18□□□□□ -1.58
PCNAP12004 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.18□□□□□ -1.58
PCNAP12004 AC023512.1-201ENST00000444513 499 ntBASIC5.18□□□□□ -1.58
PCNAP12004 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.18□□□□□ -1.58
PCNAP12004 AC069540.1-201ENST00000446320 988 ntBASIC5.18□□□□□ -1.58
PCNAP12004 RPS6P2-201ENST00000454208 705 ntBASIC5.18□□□□□ -1.58
PCNAP12004 RANP1-206ENST00000455094 651 ntBASIC5.18□□□□□ -1.58
PCNAP12004 AC010374.1-201ENST00000503762 1237 ntBASIC5.18□□□□□ -1.58
PCNAP12004 AC025459.1-201ENST00000504072 156 ntBASIC5.18□□□□□ -1.58
PCNAP12004 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.18□□□□□ -1.58
PCNAP12004 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.18□□□□□ -1.58
PCNAP12004 HMGB1P44-201ENST00000508597 572 ntBASIC5.18□□□□□ -1.58
PCNAP12004 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.18□□□□□ -1.58
PCNAP12004 BUD31P1-201ENST00000521828 359 ntBASIC5.18□□□□□ -1.58
PCNAP12004 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms