Protein–RNA interactions for Protein: P09661

SNRPA1, U2 small nuclear ribonucleoprotein A', humanhuman

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1P09661 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.48□□□□□ -1.37
SNRPA1P09661 BNIP3P1-201ENST00000547295 580 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 AC008147.3-201ENST00000548666 354 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 UBE2FP2-201ENST00000566646 462 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 AC019322.1-201ENST00000571869 389 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 AC090666.1-201ENST00000578241 445 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.48□□□□□ -1.37
SNRPA1P09661 HMGB1P51-201ENST00000605166 638 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 AC004241.3-201ENST00000611728 517 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 AC009464.1-201ENST00000615731 469 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.48□□□□□ -1.37
SNRPA1P09661 AC241377.1-201ENST00000619797 406 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNRPA1P09661 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC6.48□□□□□ -1.37
SNRPA1P09661 AP000550.3-201ENST00000637734 379 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNRPA1P09661 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNRPA1P09661 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNRPA1P09661 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.48□□□□□ -1.37
SNRPA1P09661 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNRPA1P09661 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNRPA1P09661 SDAD1P1-202ENST00000524156 2051 ntBASIC6.48□□□□□ -1.37
SNRPA1P09661 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
SNRPA1P09661 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.48□□□□□ -1.37
SNRPA1P09661 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
SNRPA1P09661 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC6.47□□□□□ -1.37
SNRPA1P09661 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNRPA1P09661 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNRPA1P09661 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.47□□□□□ -1.37
SNRPA1P09661 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNRPA1P09661 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNRPA1P09661 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNRPA1P09661 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNRPA1P09661 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNRPA1P09661 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNRPA1P09661 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SNRPA1P09661 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNRPA1P09661 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNRPA1P09661 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SNRPA1P09661 ANAPC10P1-201ENST00000395991 556 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 HMGB3P7-201ENST00000400214 611 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 AL390316.1-201ENST00000406279 553 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 AL807761.1-201ENST00000417622 171 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 NIPA2P1-201ENST00000426223 976 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 AC013262.1-201ENST00000426710 252 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 AC092634.2-201ENST00000428146 1010 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 AC007559.1-201ENST00000428736 355 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 PTP4A1P3-201ENST00000433661 420 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.47□□□□□ -1.37
SNRPA1P09661 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC6.47□□□□□ -1.37
SNRPA1P09661 AC069277.2-201ENST00000454211 432 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.47□□□□□ -1.37
SNRPA1P09661 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.47□□□□□ -1.37
SNRPA1P09661 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC6.47□□□□□ -1.37
SNRPA1P09661 MTCO1P31-201ENST00000506355 492 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 GOLGA5P1-201ENST00000507317 980 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 RNU5A-7P-201ENST00000515979 116 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.47□□□□□ -1.37
SNRPA1P09661 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC6.47□□□□□ -1.37
SNRPA1P09661 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
SNRPA1P09661 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.47□□□□□ -1.37
SNRPA1P09661 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC6.47□□□□□ -1.37
SNRPA1P09661 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC6.47□□□□□ -1.37
SNRPA1P09661 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC6.47□□□□□ -1.37
SNRPA1P09661 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.47□□□□□ -1.37
SNRPA1P09661 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.47□□□□□ -1.37
SNRPA1P09661 AF230666.2-201ENST00000602328 725 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 AL645927.2-201ENST00000618350 349 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC6.47□□□□□ -1.37
SNRPA1P09661 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNRPA1P09661 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.47□□□□□ -1.37
SNRPA1P09661 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNRPA1P09661 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SNRPA1P09661 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNRPA1P09661 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SNRPA1P09661 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.47□□□□□ -1.37
SNRPA1P09661 AC092070.2-203ENST00000598377 3644 ntBASIC6.46□□□□□ -1.37
SNRPA1P09661 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
SNRPA1P09661 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.46□□□□□ -1.38
SNRPA1P09661 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SNRPA1P09661 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC6.46□□□□□ -1.38
SNRPA1P09661 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6.46□□□□□ -1.38
SNRPA1P09661 OR1L6-202ENST00000373684 1044 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 MIR192-201ENST00000384915 110 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SNRPA1P09661 ATP5HP3-201ENST00000396994 486 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 VN1R51P-201ENST00000411675 945 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.46□□□□□ -1.38
SNRPA1P09661 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.46□□□□□ -1.38
SNRPA1P09661 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC6.46□□□□□ -1.38
SNRPA1P09661 MTCO1P45-201ENST00000431457 267 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 RPS29P9-201ENST00000440360 171 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC6.46□□□□□ -1.38
SNRPA1P09661 MTND1P33-201ENST00000446251 917 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 AL009048.1-201ENST00000450437 298 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.46□□□□□ -1.38
SNRPA1P09661 RPL32P14-201ENST00000463196 378 ntBASIC6.46□□□□□ -1.38
SNRPA1P09661 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.46□□□□□ -1.38
SNRPA1P09661 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC6.46□□□□□ -1.38
SNRPA1P09661 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms