Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
APOEP02649 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.05□□□□□ -1.6
APOEP02649 OR51H2P-202ENST00000641424 3046 ntBASIC5.05□□□□□ -1.6
APOEP02649 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.05□□□□□ -1.6
APOEP02649 CDY3P-201ENST00000454543 1618 ntBASIC5.05□□□□□ -1.6
APOEP02649 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOEP02649 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.05□□□□□ -1.6
APOEP02649 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
APOEP02649 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOEP02649 AL050305.1-201ENST00000399993 1230 ntBASIC5.05□□□□□ -1.6
APOEP02649 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOEP02649 CBX1P3-201ENST00000413296 527 ntBASIC5.05□□□□□ -1.6
APOEP02649 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
APOEP02649 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.05□□□□□ -1.6
APOEP02649 RBMY2TP-201ENST00000451162 947 ntBASIC5.05□□□□□ -1.6
APOEP02649 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC5.05□□□□□ -1.6
APOEP02649 AURKAPS2-201ENST00000454983 333 ntBASIC5.05□□□□□ -1.6
APOEP02649 AL356390.1-201ENST00000455684 397 ntBASIC5.05□□□□□ -1.6
APOEP02649 AC092324.1-201ENST00000468671 324 ntBASIC5.05□□□□□ -1.6
APOEP02649 RPL7AP10-201ENST00000481016 791 ntBASIC5.05□□□□□ -1.6
APOEP02649 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
APOEP02649 AC138409.2-202ENST00000507274 458 ntBASIC5.05□□□□□ -1.6
APOEP02649 MORF4L1P3-201ENST00000525966 950 ntBASIC5.05□□□□□ -1.6
APOEP02649 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.05□□□□□ -1.6
APOEP02649 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC5.05□□□□□ -1.6
APOEP02649 AL049839.1-201ENST00000556151 657 ntBASIC5.05□□□□□ -1.6
APOEP02649 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC5.05□□□□□ -1.6
APOEP02649 CYCSP40-201ENST00000575927 294 ntBASIC5.05□□□□□ -1.6
APOEP02649 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.05□□□□□ -1.6
APOEP02649 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.05□□□□□ -1.6
APOEP02649 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
APOEP02649 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOEP02649 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC5.05□□□□□ -1.6
APOEP02649 AC015871.5-202ENST00000623252 701 ntBASIC5.05□□□□□ -1.6
APOEP02649 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
APOEP02649 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
APOEP02649 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
APOEP02649 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
APOEP02649 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOEP02649 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.05□□□□□ -1.6
APOEP02649 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.05□□□□□ -1.6
APOEP02649 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOEP02649 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.04□□□□□ -1.6
APOEP02649 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
APOEP02649 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
APOEP02649 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
APOEP02649 AL035419.1-201ENST00000397037 564 ntBASIC5.04□□□□□ -1.6
APOEP02649 RNA5SP345-201ENST00000410646 108 ntBASIC5.04□□□□□ -1.6
APOEP02649 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.04□□□□□ -1.6
APOEP02649 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.04□□□□□ -1.6
APOEP02649 AL031584.1-201ENST00000447169 754 ntBASIC5.04□□□□□ -1.6
APOEP02649 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.04□□□□□ -1.6
APOEP02649 AL591473.1-201ENST00000464297 313 ntBASIC5.04□□□□□ -1.6
APOEP02649 AC090686.1-201ENST00000481577 749 ntBASIC5.04□□□□□ -1.6
APOEP02649 LDHBP3-201ENST00000514909 822 ntBASIC5.04□□□□□ -1.6
APOEP02649 AC138938.1-201ENST00000515431 782 ntBASIC5.04□□□□□ -1.6
APOEP02649 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.04□□□□□ -1.6
APOEP02649 AC026688.1-201ENST00000520639 1168 ntBASIC5.04□□□□□ -1.6
APOEP02649 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.04□□□□□ -1.6
APOEP02649 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
APOEP02649 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.04□□□□□ -1.6
APOEP02649 AC012414.7-202ENST00000622705 1090 ntBASIC5.04□□□□□ -1.6
APOEP02649 AC091953.3-201ENST00000623220 236 ntBASIC5.04□□□□□ -1.6
APOEP02649 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.04□□□□□ -1.6
APOEP02649 AL596275.2-204ENST00000641628 552 ntBASIC5.04□□□□□ -1.6
APOEP02649 AL596275.2-206ENST00000641957 626 ntBASIC5.04□□□□□ -1.6
APOEP02649 AC107068.1-201ENST00000563286 4218 ntBASIC5.04□□□□□ -1.6
APOEP02649 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
APOEP02649 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.04□□□□□ -1.6
APOEP02649 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
APOEP02649 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.04□□□□□ -1.6
APOEP02649 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
APOEP02649 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
APOEP02649 AC009643.2-201ENST00000603543 1448 ntBASIC5.04□□□□□ -1.6
APOEP02649 AC132825.1-201ENST00000463573 2247 ntBASIC5.04□□□□□ -1.6
APOEP02649 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.04□□□□□ -1.6
APOEP02649 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
APOEP02649 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.04□□□□□ -1.6
APOEP02649 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
APOEP02649 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
APOEP02649 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
APOEP02649 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.03□□□□□ -1.6
APOEP02649 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
APOEP02649 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
APOEP02649 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
APOEP02649 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.03□□□□□ -1.6
APOEP02649 MIR1271-201ENST00000408537 86 ntBASIC5.03□□□□□ -1.6
APOEP02649 RNA5SP113-201ENST00000410486 84 ntBASIC5.03□□□□□ -1.6
APOEP02649 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.03□□□□□ -1.6
APOEP02649 AC008072.1-201ENST00000434254 824 ntBASIC5.03□□□□□ -1.6
APOEP02649 AC013410.1-201ENST00000436223 1232 ntBASIC5.03□□□□□ -1.6
APOEP02649 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.03□□□□□ -1.6
APOEP02649 AC010733.1-201ENST00000451515 401 ntBASIC5.03□□□□□ -1.6
APOEP02649 AC022795.1-201ENST00000473808 480 ntBASIC5.03□□□□□ -1.6
APOEP02649 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.03□□□□□ -1.6
APOEP02649 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.03□□□□□ -1.6
APOEP02649 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.03□□□□□ -1.6
APOEP02649 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.03□□□□□ -1.6
APOEP02649 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
APOEP02649 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms