Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLPTM1O96005 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLPTM1O96005 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLPTM1O96005 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLPTM1O96005 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLPTM1O96005 AC005294.1-201ENST00000355509 281 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.83□□□□□ -1.64
CLPTM1O96005 MIR323A-201ENST00000362199 86 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLPTM1O96005 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.83□□□□□ -1.64
CLPTM1O96005 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CLPTM1O96005 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLPTM1O96005 AP000580.1-201ENST00000404439 358 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AL596448.1-201ENST00000415024 392 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.83□□□□□ -1.64
CLPTM1O96005 AL513325.1-201ENST00000417716 1034 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.83□□□□□ -1.64
CLPTM1O96005 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC4.83□□□□□ -1.64
CLPTM1O96005 TNPO1P1-201ENST00000423641 1138 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.83□□□□□ -1.64
CLPTM1O96005 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.83□□□□□ -1.64
CLPTM1O96005 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.83□□□□□ -1.64
CLPTM1O96005 AC006335.2-201ENST00000437993 330 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 ARL4AP3-201ENST00000441452 574 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLPTM1O96005 AL450996.1-201ENST00000445574 1202 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 RPL31P20-201ENST00000449593 360 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.83□□□□□ -1.64
CLPTM1O96005 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.83□□□□□ -1.64
CLPTM1O96005 RPSAP39-201ENST00000467439 883 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AC108729.2-201ENST00000476543 840 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 UBA52P3-201ENST00000491303 382 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC4.83□□□□□ -1.64
CLPTM1O96005 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.83□□□□□ -1.64
CLPTM1O96005 AC010374.2-201ENST00000512933 535 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.83□□□□□ -1.64
CLPTM1O96005 AP003102.1-201ENST00000525638 661 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AP001804.2-201ENST00000533932 910 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AC024940.3-201ENST00000538551 316 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.83□□□□□ -1.64
CLPTM1O96005 AC027176.2-201ENST00000559166 746 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AC092868.3-201ENST00000560515 784 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.83□□□□□ -1.64
CLPTM1O96005 AC079148.1-201ENST00000565944 819 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 MRPS21P7-201ENST00000566937 238 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC4.83□□□□□ -1.64
CLPTM1O96005 AP005403.1-201ENST00000579720 229 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC4.83□□□□□ -1.64
CLPTM1O96005 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.83□□□□□ -1.64
CLPTM1O96005 AC011445.2-201ENST00000599274 173 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AL133247.2-201ENST00000603236 482 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.83□□□□□ -1.64
CLPTM1O96005 AC023813.4-201ENST00000607580 580 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AL391834.1-201ENST00000609609 560 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AC110792.4-201ENST00000609843 298 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AC108359.1-201ENST00000616451 1211 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 AC009704.2-201ENST00000618739 483 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 CU639417.4-201ENST00000623928 207 ntBASIC4.83□□□□□ -1.64
CLPTM1O96005 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.83□□□□□ -1.64
CLPTM1O96005 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CLPTM1O96005 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CLPTM1O96005 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.82□□□□□ -1.64
CLPTM1O96005 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLPTM1O96005 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
CLPTM1O96005 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.82□□□□□ -1.64
CLPTM1O96005 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.82□□□□□ -1.64
CLPTM1O96005 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLPTM1O96005 OR51H2P-202ENST00000641424 3046 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLPTM1O96005 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.82□□□□□ -1.64
CLPTM1O96005 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLPTM1O96005 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLPTM1O96005 MIR365B-201ENST00000362317 111 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CLPTM1O96005 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLPTM1O96005 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLPTM1O96005 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CLPTM1O96005 U3.32-201ENST00000408116 212 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 RN7SKP206-201ENST00000410823 293 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 SEPT7P8-201ENST00000413308 775 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 AC009302.1-201ENST00000417147 390 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 AC092570.3-201ENST00000420113 693 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 AL133173.1-201ENST00000423458 397 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 MTND4P24-201ENST00000424002 397 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.82□□□□□ -1.64
CLPTM1O96005 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.82□□□□□ -1.64
CLPTM1O96005 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.82□□□□□ -1.64
CLPTM1O96005 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.82□□□□□ -1.64
CLPTM1O96005 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.82□□□□□ -1.64
CLPTM1O96005 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CLPTM1O96005 AC093166.2-201ENST00000455969 1017 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 EIF2S2P5-201ENST00000457635 968 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 RPL7AP28-201ENST00000464513 571 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 AC105918.1-201ENST00000474399 838 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 AC092902.1-201ENST00000486999 259 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.82□□□□□ -1.64
CLPTM1O96005 RPEP1-201ENST00000504507 658 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 AK4P6-201ENST00000505168 528 ntBASIC4.82□□□□□ -1.64
CLPTM1O96005 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms