Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS4BO75351 AC016739.1-201ENST00000405359 345 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 RPL35AP3-201ENST00000414680 288 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS4BO75351 RNF10P1-201ENST00000418589 369 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 RPL34P3-201ENST00000421454 338 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 MRPS21P2-201ENST00000424704 264 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 MGAT2P2-201ENST00000427194 797 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 VTI1BP4-201ENST00000427516 527 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 DEFA9P-201ENST00000433042 285 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 NANOGP2-201ENST00000435391 727 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 MTND2P40-201ENST00000436718 841 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 PCBP2P1-201ENST00000437262 977 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS4BO75351 AL117351.1-201ENST00000438864 766 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS4BO75351 OTX2P1-201ENST00000450956 354 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS4BO75351 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.6□□□□□ -1.51
VPS4BO75351 RPL7P32-201ENST00000457119 744 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS4BO75351 MTND2P14-201ENST00000482139 351 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS4BO75351 RPL32P9-201ENST00000487963 407 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS4BO75351 AC010486.3-201ENST00000511602 785 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.6□□□□□ -1.51
VPS4BO75351 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS4BO75351 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.6□□□□□ -1.51
VPS4BO75351 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS4BO75351 DUX4L52-201ENST00000549363 777 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS4BO75351 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.6□□□□□ -1.51
VPS4BO75351 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.6□□□□□ -1.51
VPS4BO75351 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS4BO75351 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS4BO75351 AC010547.6-201ENST00000571789 193 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS4BO75351 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS4BO75351 AC013468.1-201ENST00000608680 598 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 AC100847.1-201ENST00000611316 481 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 AC016769.4-201ENST00000616893 535 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 AL158062.1-201ENST00000619632 745 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 AL035661.1-201ENST00000620459 1144 ntBASIC5.6□□□□□ -1.51
VPS4BO75351 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS4BO75351 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
VPS4BO75351 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS4BO75351 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
VPS4BO75351 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS4BO75351 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS4BO75351 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS4BO75351 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS4BO75351 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS4BO75351 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS4BO75351 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
VPS4BO75351 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS4BO75351 MT-RNR2-201ENST00000387347 1559 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 AF287957.1-201ENST00000607368 1595 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 ZNF876P-202ENST00000398732 1485 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS4BO75351 AC007842.1-201ENST00000597336 2039 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 AL138820.1-201ENST00000617901 5305 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.59□□□□□ -1.51
VPS4BO75351 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
VPS4BO75351 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS4BO75351 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS4BO75351 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS4BO75351 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS4BO75351 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS4BO75351 AC092681.1-201ENST00000297369 291 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 OR5H2-201ENST00000355273 945 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
VPS4BO75351 RNA5SP27-201ENST00000363839 119 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 SNORA58B-201ENST00000364259 136 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS4BO75351 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
VPS4BO75351 DNAJC19P6-201ENST00000401853 280 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 RNU4-34P-201ENST00000410431 124 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS4BO75351 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS4BO75351 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS4BO75351 BX284632.2-201ENST00000421091 399 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS4BO75351 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 YWHAZP2-201ENST00000440317 728 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 EEF1A1P39-201ENST00000440791 250 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 MTCYBP42-201ENST00000444653 1130 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 OR7E116P-201ENST00000448529 957 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS4BO75351 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS4BO75351 AC107015.1-201ENST00000466902 747 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 AL122020.1-201ENST00000472287 459 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 RPS7P6-201ENST00000485777 579 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS4BO75351 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.59□□□□□ -1.51
VPS4BO75351 AC034244.1-201ENST00000507687 207 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 AC109481.1-201ENST00000509173 282 ntBASIC5.59□□□□□ -1.51
VPS4BO75351 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
VPS4BO75351 AC108043.1-201ENST00000512696 574 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms