Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM38O00635 AC096571.1-202ENST00000506634 735 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 MIR2117-201ENST00000516780 80 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM38O00635 NRBF2P4-201ENST00000520874 850 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 AC018442.3-201ENST00000523025 183 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 OR5AK3P-201ENST00000527486 1297 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.61□□□□□ -1.51
TRIM38O00635 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC5.61□□□□□ -1.51
TRIM38O00635 AP005435.3-201ENST00000531260 3198 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM38O00635 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM38O00635 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM38O00635 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM38O00635 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM38O00635 RNASE9-208ENST00000556208 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM38O00635 RNASE9-210ENST00000557209 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM38O00635 AC084759.1-201ENST00000561168 290 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 AC023825.1-201ENST00000566704 1030 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 AC015720.2-201ENST00000567709 334 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM38O00635 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM38O00635 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM38O00635 AP000919.1-202ENST00000581139 1264 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 AC010487.1-201ENST00000594408 1172 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 ZNF849P-201ENST00000594711 1566 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM38O00635 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC5.61□□□□□ -1.51
TRIM38O00635 HIRAP1-201ENST00000605318 787 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 AC099785.1-201ENST00000605697 437 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 AC010245.2-201ENST00000606908 1167 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 U6.48-201ENST00000618523 106 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 AC005840.5-201ENST00000619166 599 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.61□□□□□ -1.51
TRIM38O00635 AC093775.1-201ENST00000624154 1868 ntBASIC5.61□□□□□ -1.51
TRIM38O00635 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
TRIM38O00635 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM38O00635 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
TRIM38O00635 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
TRIM38O00635 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.61□□□□□ -1.51
TRIM38O00635 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
TRIM38O00635 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM38O00635 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM38O00635 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TRIM38O00635 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.6□□□□□ -1.51
TRIM38O00635 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TRIM38O00635 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM38O00635 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM38O00635 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
TRIM38O00635 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM38O00635 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM38O00635 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM38O00635 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM38O00635 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 SNORA70-201ENST00000384436 135 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TRIM38O00635 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM38O00635 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TRIM38O00635 RPL23AP59-201ENST00000399415 461 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM38O00635 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM38O00635 TCEA1P4-201ENST00000415066 844 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM38O00635 RNGTTP1-201ENST00000420965 728 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 NPM1P22-201ENST00000427761 952 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM38O00635 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM38O00635 GAPDHP58-201ENST00000438477 1006 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM38O00635 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM38O00635 AC087672.1-201ENST00000479876 766 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 AC093270.2-201ENST00000486157 792 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 WDR78-207ENST00000488333 613 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM38O00635 HMGB1P38-201ENST00000490557 577 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 AC008953.1-201ENST00000497334 318 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM38O00635 AC093890.1-201ENST00000502554 540 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM38O00635 AC111193.1-201ENST00000504097 155 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM38O00635 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM38O00635 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM38O00635 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM38O00635 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM38O00635 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM38O00635 LRRC34P1-201ENST00000542742 915 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 AC011611.5-201ENST00000552477 578 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM38O00635 AC096996.1-201ENST00000563813 325 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.6□□□□□ -1.51
TRIM38O00635 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM38O00635 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.6□□□□□ -1.51
TRIM38O00635 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM38O00635 BNIP3P24-201ENST00000593398 557 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.6□□□□□ -1.51
TRIM38O00635 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.6□□□□□ -1.51
TRIM38O00635 AC013444.2-201ENST00000603317 787 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 SUGT1P3-202ENST00000604259 383 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 AC004948.1-201ENST00000609858 672 ntBASIC5.6□□□□□ -1.51
TRIM38O00635 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms