Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
SDCBPO00560 ICE2P1-201ENST00000512800 1849 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SDCBPO00560 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SDCBPO00560 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SDCBPO00560 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SDCBPO00560 RN7SKP104-201ENST00000362605 328 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 RN7SKP95-201ENST00000362860 303 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SDCBPO00560 AC114755.2-201ENST00000413520 361 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 RPL21P108-201ENST00000413857 481 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 RPL12P43-201ENST00000420608 499 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 AC004448.2-201ENST00000422360 586 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 RBMY2QP-201ENST00000429799 1147 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SDCBPO00560 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.96□□□□□ -1.78
SDCBPO00560 RPL23AP56-201ENST00000460778 453 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 AC090589.1-201ENST00000473109 362 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 AC074386.1-201ENST00000476560 767 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 AC004815.1-201ENST00000484185 331 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC3.96□□□□□ -1.78
SDCBPO00560 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.96□□□□□ -1.78
SDCBPO00560 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.96□□□□□ -1.78
SDCBPO00560 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC3.96□□□□□ -1.78
SDCBPO00560 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.96□□□□□ -1.78
SDCBPO00560 AC133555.2-201ENST00000550213 292 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.96□□□□□ -1.78
SDCBPO00560 AC087763.1-201ENST00000603391 286 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 AC020910.3-201ENST00000603701 874 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 AC011815.3-201ENST00000624194 473 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 CR381572.2-201ENST00000624852 397 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.96□□□□□ -1.78
SDCBPO00560 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
SDCBPO00560 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SDCBPO00560 HCFC2P1-201ENST00000392864 1592 ntBASIC3.96□□□□□ -1.78
SDCBPO00560 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.96□□□□□ -1.78
SDCBPO00560 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SDCBPO00560 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SDCBPO00560 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.96□□□□□ -1.78
SDCBPO00560 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
SDCBPO00560 RARSP1-201ENST00000542842 1418 ntBASIC3.95□□□□□ -1.78
SDCBPO00560 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
SDCBPO00560 CR788268.1-201ENST00000603931 1809 ntBASIC3.95□□□□□ -1.78
SDCBPO00560 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SDCBPO00560 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
SDCBPO00560 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SDCBPO00560 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.95□□□□□ -1.78
SDCBPO00560 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC3.95□□□□□ -1.78
SDCBPO00560 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SDCBPO00560 HMGB3P7-201ENST00000400214 611 ntBASIC3.95□□□□□ -1.78
SDCBPO00560 MIR921-201ENST00000401133 56 ntBASIC3.95□□□□□ -1.78
SDCBPO00560 LINC00993-201ENST00000420453 540 ntBASIC3.95□□□□□ -1.78
SDCBPO00560 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.95□□□□□ -1.78
SDCBPO00560 TRY2P-201ENST00000448860 689 ntBASIC3.95□□□□□ -1.78
SDCBPO00560 ATP5G1P3-201ENST00000463301 410 ntBASIC3.95□□□□□ -1.78
SDCBPO00560 RN7SL41P-201ENST00000476144 297 ntBASIC3.95□□□□□ -1.78
SDCBPO00560 RN7SL214P-201ENST00000487317 265 ntBASIC3.95□□□□□ -1.78
SDCBPO00560 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.95□□□□□ -1.78
SDCBPO00560 AC093763.2-201ENST00000505334 1223 ntBASIC3.95□□□□□ -1.78
SDCBPO00560 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.95□□□□□ -1.78
SDCBPO00560 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC3.95□□□□□ -1.78
SDCBPO00560 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC3.95□□□□□ -1.78
SDCBPO00560 AC027455.1-201ENST00000574104 594 ntBASIC3.95□□□□□ -1.78
SDCBPO00560 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC3.95□□□□□ -1.78
SDCBPO00560 SLC25A36P1-201ENST00000590111 465 ntBASIC3.95□□□□□ -1.78
SDCBPO00560 AC011487.3-201ENST00000593607 453 ntBASIC3.95□□□□□ -1.78
SDCBPO00560 AL121890.2-201ENST00000617644 465 ntBASIC3.95□□□□□ -1.78
SDCBPO00560 TMEM30CP-203ENST00000637814 1035 ntBASIC3.95□□□□□ -1.78
SDCBPO00560 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.95□□□□□ -1.78
SDCBPO00560 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SDCBPO00560 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
SDCBPO00560 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SDCBPO00560 SMG1P6-201ENST00000532337 2930 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.94□□□□□ -1.78
SDCBPO00560 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SDCBPO00560 LINC01109-201ENST00000603837 3081 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 SAMMSON-226ENST00000642089 1582 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.94□□□□□ -1.78
SDCBPO00560 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SDCBPO00560 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC3.94□□□□□ -1.78
SDCBPO00560 AC027290.2-201ENST00000623210 18662 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 NR1H5P-201ENST00000452683 1377 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SDCBPO00560 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SDCBPO00560 RNU4-44P-201ENST00000363050 141 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 RNA5SP123-201ENST00000363244 119 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.94□□□□□ -1.78
SDCBPO00560 MIR1178-201ENST00000408396 91 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC3.94□□□□□ -1.78
SDCBPO00560 RPL23AP27-201ENST00000415161 451 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC3.94□□□□□ -1.78
SDCBPO00560 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC3.94□□□□□ -1.78
SDCBPO00560 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC3.94□□□□□ -1.78
SDCBPO00560 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SDCBPO00560 AC018638.3-201ENST00000461273 132 ntBASIC3.94□□□□□ -1.78
SDCBPO00560 DUBR-205ENST00000495228 411 ntTSL 2 BASIC3.94□□□□□ -1.78
SDCBPO00560 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC3.94□□□□□ -1.78
SDCBPO00560 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.94□□□□□ -1.78
SDCBPO00560 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC3.94□□□□□ -1.78
SDCBPO00560 RNU1-6P-201ENST00000516290 144 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms