Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
O00370 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
O00370 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
O00370 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
O00370 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.29□□□□□ -1.56
O00370 AL136131.1-201ENST00000406079 803 ntBASIC5.29□□□□□ -1.56
O00370 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.29□□□□□ -1.56
O00370 PSMD10P3-201ENST00000437000 448 ntBASIC5.29□□□□□ -1.56
O00370 PTMAP6-201ENST00000439110 327 ntBASIC5.29□□□□□ -1.56
O00370 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.29□□□□□ -1.56
O00370 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.29□□□□□ -1.56
O00370 MRPL35P2-201ENST00000448009 511 ntBASIC5.29□□□□□ -1.56
O00370 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.29□□□□□ -1.56
O00370 AC105918.1-201ENST00000474399 838 ntBASIC5.29□□□□□ -1.56
O00370 AC073358.1-201ENST00000505671 684 ntBASIC5.29□□□□□ -1.56
O00370 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.29□□□□□ -1.56
O00370 MRPS33P2-201ENST00000507850 322 ntBASIC5.29□□□□□ -1.56
O00370 MTND2P31-201ENST00000512602 616 ntBASIC5.29□□□□□ -1.56
O00370 AC110775.1-201ENST00000513721 462 ntBASIC5.29□□□□□ -1.56
O00370 AP003168.1-201ENST00000530091 307 ntBASIC5.29□□□□□ -1.56
O00370 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC5.29□□□□□ -1.56
O00370 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.29□□□□□ -1.56
O00370 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC5.29□□□□□ -1.56
O00370 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.29□□□□□ -1.56
O00370 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.29□□□□□ -1.56
O00370 FAM60CP-201ENST00000591086 664 ntBASIC5.29□□□□□ -1.56
O00370 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC5.29□□□□□ -1.56
O00370 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.29□□□□□ -1.56
O00370 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.29□□□□□ -1.56
O00370 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.29□□□□□ -1.56
O00370 AL356317.1-201ENST00000396110 1436 ntBASIC5.29□□□□□ -1.56
O00370 OR51C1P-202ENST00000641159 1444 ntBASIC5.29□□□□□ -1.56
O00370 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.29□□□□□ -1.56
O00370 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
O00370 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
O00370 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.29□□□□□ -1.56
O00370 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
O00370 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC5.28□□□□□ -1.56
O00370 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
O00370 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
O00370 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.28□□□□□ -1.56
O00370 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
O00370 SNORA70-201ENST00000384436 135 ntBASIC5.28□□□□□ -1.56
O00370 AL645927.1-201ENST00000396783 406 ntBASIC5.28□□□□□ -1.56
O00370 AL139039.2-201ENST00000407436 479 ntBASIC5.28□□□□□ -1.56
O00370 RN7SKP125-201ENST00000410481 302 ntBASIC5.28□□□□□ -1.56
O00370 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.28□□□□□ -1.56
O00370 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.28□□□□□ -1.56
O00370 AF186996.5-201ENST00000418098 904 ntBASIC5.28□□□□□ -1.56
O00370 AJ239321.1-201ENST00000424255 564 ntBASIC5.28□□□□□ -1.56
O00370 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.28□□□□□ -1.56
O00370 NPM1P33-201ENST00000438918 872 ntBASIC5.28□□□□□ -1.56
O00370 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.28□□□□□ -1.56
O00370 AL137845.2-201ENST00000444292 988 ntBASIC5.28□□□□□ -1.56
O00370 RPL31P53-201ENST00000457065 348 ntBASIC5.28□□□□□ -1.56
O00370 AC004453.1-201ENST00000487895 408 ntBASIC5.28□□□□□ -1.56
O00370 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC5.28□□□□□ -1.56
O00370 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
O00370 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.28□□□□□ -1.56
O00370 AC147055.3-201ENST00000510547 851 ntBASIC5.28□□□□□ -1.56
O00370 RNA5SP464-201ENST00000516251 108 ntBASIC5.28□□□□□ -1.56
O00370 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.28□□□□□ -1.56
O00370 AC005000.1-201ENST00000536192 288 ntBASIC5.28□□□□□ -1.56
O00370 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.28□□□□□ -1.56
O00370 AGGF1P9-201ENST00000561884 913 ntBASIC5.28□□□□□ -1.56
O00370 MIR7155-201ENST00000615925 56 ntBASIC5.28□□□□□ -1.56
O00370 AL590410.1-201ENST00000617925 333 ntBASIC5.28□□□□□ -1.56
O00370 AC068870.2-201ENST00000620635 389 ntBASIC5.28□□□□□ -1.56
O00370 CFTRP2-201ENST00000634304 199 ntBASIC5.28□□□□□ -1.56
O00370 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
O00370 AL163152.1-201ENST00000642001 374 ntBASIC5.28□□□□□ -1.56
O00370 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
O00370 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.28□□□□□ -1.56
O00370 ECM1P2-201ENST00000503354 1577 ntBASIC5.28□□□□□ -1.56
O00370 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
O00370 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.28□□□□□ -1.56
O00370 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
O00370 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.27□□□□□ -1.57
O00370 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.27□□□□□ -1.57
O00370 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
O00370 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
O00370 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.27□□□□□ -1.57
O00370 RN7SKP104-201ENST00000362605 328 ntBASIC5.27□□□□□ -1.57
O00370 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
O00370 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
O00370 CHMP1B2P-201ENST00000399581 597 ntBASIC5.27□□□□□ -1.57
O00370 Z97832.1-201ENST00000402490 328 ntBASIC5.27□□□□□ -1.57
O00370 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.27□□□□□ -1.57
O00370 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.27□□□□□ -1.57
O00370 RBMY2QP-201ENST00000429799 1147 ntBASIC5.27□□□□□ -1.57
O00370 AL392003.1-201ENST00000434394 243 ntBASIC5.27□□□□□ -1.57
O00370 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.27□□□□□ -1.57
O00370 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.27□□□□□ -1.57
O00370 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.27□□□□□ -1.57
O00370 SCAND3P1-201ENST00000439854 1060 ntBASIC5.27□□□□□ -1.57
O00370 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.27□□□□□ -1.57
O00370 CEACAMP7-201ENST00000444105 496 ntBASIC5.27□□□□□ -1.57
O00370 AL356981.1-201ENST00000454879 684 ntBASIC5.27□□□□□ -1.57
O00370 RPL5P22-201ENST00000480199 884 ntBASIC5.27□□□□□ -1.57
O00370 AC073073.1-201ENST00000493920 463 ntBASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms