Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 PRNCR1-201ENST00000635449 12727 ntBASIC5.84□□□□□ -1.48
SHISA3A0PJX4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 MAPK10-270ENST00000641102 3538 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 PPHLN1-225ENST00000619544 1449 ntTSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 NACA-203ENST00000454682 6629 ntTSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 Y_RNA.160-201ENST00000363677 92 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 C1orf54-203ENST00000369102 1251 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 SNORA51.7-201ENST00000384171 134 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 Y_RNA.509-201ENST00000384506 99 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 DNAJA1P4-201ENST00000406473 1166 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 RN7SKP222-201ENST00000410651 315 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 RPS20P15-201ENST00000412792 311 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC092634.6-201ENST00000418558 192 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC239367.3-201ENST00000428996 814 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AL136231.1-201ENST00000429407 730 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AL451074.3-201ENST00000437709 472 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC108039.2-201ENST00000440214 359 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 BMS1P10-201ENST00000443754 1120 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 RPL26P30-201ENST00000453533 435 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 GAPDHP53-201ENST00000458397 924 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 RPSAP24-201ENST00000461543 873 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 RPL23AP64-201ENST00000469465 435 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 ACTR3P3-201ENST00000480448 893 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 NENFP3-201ENST00000503735 313 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 OR7E99P-201ENST00000505750 922 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC022447.3-201ENST00000506865 495 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 SNORA48.10-201ENST00000516965 160 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 HIGD1AP6-201ENST00000521833 279 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC073916.1-201ENST00000545095 130 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AL512310.1-201ENST00000548639 172 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 LYZ-202ENST00000548839 558 ntTSL 2 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AL121579.2-201ENST00000555466 590 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 CENPUP2-201ENST00000555897 1186 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 MIR5705-201ENST00000579870 89 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC009977.1-201ENST00000586015 570 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC011921.2-201ENST00000589465 152 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 SUGT1P3-202ENST00000604259 383 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC008115.3-201ENST00000614874 549 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 RMDN2-AS1-207ENST00000627614 765 ntTSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC110079.2-202ENST00000629093 698 ntTSL 3 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC073488.7-201ENST00000633785 778 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 MIR1321-201ENST00000637766 79 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 OFD1P5Y-201ENST00000447585 2590 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 MAPK10-261ENST00000641050 3109 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 OR2A3P-202ENST00000641249 1776 ntBASIC5.83□□□□□ -1.48
SHISA3A0PJX4 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
SHISA3A0PJX4 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.82□□□□□ -1.48
SHISA3A0PJX4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms