Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 RN7SKP126-201ENST00000411143 300 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 BX323845.1-201ENST00000432417 179 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 OR52B5P-201ENST00000435337 951 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AC245047.2-201ENST00000441060 530 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AL606490.1-201ENST00000452266 765 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AC093166.2-201ENST00000455969 1017 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 RNA5SP303-201ENST00000516192 130 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AC027308.1-201ENST00000517993 110 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 OR4A46P-201ENST00000527255 933 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AC068714.1-201ENST00000559623 800 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AC095055.1-201ENST00000603472 1113 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AL512329.2-201ENST00000607350 548 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AC008115.4-201ENST00000619780 775 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AC145207.9-201ENST00000623802 325 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 OR52B5P-202ENST00000641118 1110 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 LINC01355-201ENST00000566551 5444 ntBASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.38□□□□□ -1.71
RHBDD3Q9Y3P4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 ZNF733P-202ENST00000444809 1573 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 SNORA17.1-201ENST00000362945 126 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 RN7SKP113-201ENST00000363891 295 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 RNU6-1251P-201ENST00000364502 107 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AL391361.1-201ENST00000405580 489 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 MIR1286-201ENST00000408112 78 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 SNORA11.3-201ENST00000408471 128 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AC019050.1-201ENST00000418508 492 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AL392003.1-201ENST00000434394 243 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 CACYBPP1-201ENST00000438592 684 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AL450023.3-201ENST00000440592 271 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AC004980.3-201ENST00000447046 365 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 PPIAP21-201ENST00000464473 501 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AC138938.1-201ENST00000515431 782 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 BNIP3P1-201ENST00000547295 580 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 NDUFB4P11-201ENST00000560510 395 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AC126915.2-201ENST00000610957 190 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 SNORA11.6-201ENST00000619030 128 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AC092159.4-201ENST00000624944 550 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 AP001273.1-201ENST00000624493 3152 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 DHX9P1-201ENST00000436565 3076 ntBASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
RHBDD3Q9Y3P4 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms