Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
SIX4Q9UIU6 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AC099654.2-201ENST00000433031 1980 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 MTHFD2P5-201ENST00000320415 844 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 SNORA73.1-201ENST00000363107 205 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 RNU6-40P-201ENST00000384254 107 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 MIR620-201ENST00000385232 95 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AL356057.1-202ENST00000402263 756 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 SNORA11B-201ENST00000408175 129 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 TBCAP2-201ENST00000416175 326 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AC104837.2-201ENST00000427236 424 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 SBDSP1-204ENST00000453858 737 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 SNRPCP3-201ENST00000474888 476 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AC091544.1-201ENST00000484702 348 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AC016550.1-201ENST00000505348 785 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 GAPDHP56-201ENST00000506031 988 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AC119751.4-201ENST00000507498 357 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 RNA5SP230-201ENST00000517039 122 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 SEC11B-201ENST00000518383 499 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AC027176.2-201ENST00000559166 746 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 BNIP3P40-201ENST00000596017 556 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AC020910.3-201ENST00000603701 874 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AL450270.1-201ENST00000606160 391 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 FAM25E-202ENST00000608562 189 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AP001521.2-201ENST00000608772 546 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AL022401.1-201ENST00000619498 108 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AL445493.3-201ENST00000619568 477 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 BX005214.3-202ENST00000619809 325 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AC023510.2-201ENST00000622162 746 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 GVINP1-202ENST00000531871 7271 ntBASIC5.3□□□□□ -1.56
SIX4Q9UIU6 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.3□□□□□ -1.56
SIX4Q9UIU6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 SCARNA15-201ENST00000607520 4325 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 MIR421-201ENST00000365696 85 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 GCNT6-201ENST00000379591 934 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 MRPS21P2-201ENST00000424704 264 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 NPM1P26-201ENST00000426339 738 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 PRPF38AP2-201ENST00000438179 851 ntBASIC5.29□□□□□ -1.56
SIX4Q9UIU6 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.29□□□□□ -1.56
SIX4Q9UIU6 AC073073.1-201ENST00000493920 463 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms