Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 BNIP3P19-201ENST00000605397 577 ntBASIC4.72□□□□□ -1.65
CHD7Q9P2D1 AC007546.1-201ENST00000619452 559 ntBASIC4.72□□□□□ -1.65
CHD7Q9P2D1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 AL445363.3-201ENST00000623080 671 ntBASIC4.72□□□□□ -1.65
CHD7Q9P2D1 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 ADAM24P-201ENST00000398655 2101 ntBASIC4.72□□□□□ -1.65
CHD7Q9P2D1 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.72□□□□□ -1.65
CHD7Q9P2D1 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CHD7Q9P2D1 AC233289.1-201ENST00000403700 508 ntBASIC4.71□□□□□ -1.65
CHD7Q9P2D1 OR7E10P-201ENST00000526420 991 ntBASIC4.71□□□□□ -1.65
CHD7Q9P2D1 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.71□□□□□ -1.65
CHD7Q9P2D1 MIR6891-201ENST00000618788 93 ntBASIC4.71□□□□□ -1.65
CHD7Q9P2D1 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.71□□□□□ -1.65
CHD7Q9P2D1 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
CHD7Q9P2D1 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CHD7Q9P2D1 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CHD7Q9P2D1 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CHD7Q9P2D1 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.71□□□□□ -1.65
CHD7Q9P2D1 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CHD7Q9P2D1 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CHD7Q9P2D1 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.71□□□□□ -1.65
CHD7Q9P2D1 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 NACA-203ENST00000454682 6629 ntTSL 5 BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 RN7SKP235-201ENST00000410662 305 ntBASIC4.71□□□□□ -1.66
CHD7Q9P2D1 RPS3AP12-201ENST00000443616 753 ntBASIC4.71□□□□□ -1.66
CHD7Q9P2D1 AC023271.1-201ENST00000445936 1090 ntBASIC4.71□□□□□ -1.66
CHD7Q9P2D1 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 AC026367.3-201ENST00000619032 590 ntBASIC4.71□□□□□ -1.66
CHD7Q9P2D1 AC009120.7-201ENST00000623452 780 ntBASIC4.71□□□□□ -1.66
CHD7Q9P2D1 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 LINC02035-201ENST00000610128 5476 ntBASIC4.71□□□□□ -1.66
CHD7Q9P2D1 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 BX679664.2-201ENST00000439282 283 ntBASIC4.71□□□□□ -1.66
CHD7Q9P2D1 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 AC119751.5-201ENST00000514077 770 ntBASIC4.71□□□□□ -1.66
CHD7Q9P2D1 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 AC027807.1-201ENST00000559921 996 ntBASIC4.71□□□□□ -1.66
CHD7Q9P2D1 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.71□□□□□ -1.66
CHD7Q9P2D1 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.7□□□□□ -1.66
CHD7Q9P2D1 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 RN7SKP17-201ENST00000411242 351 ntBASIC4.7□□□□□ -1.66
CHD7Q9P2D1 NPM1P26-201ENST00000426339 738 ntBASIC4.7□□□□□ -1.66
CHD7Q9P2D1 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 AL162151.2-201ENST00000448875 158 ntBASIC4.7□□□□□ -1.66
CHD7Q9P2D1 AC007688.1-201ENST00000475592 759 ntBASIC4.7□□□□□ -1.66
CHD7Q9P2D1 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 TRMT10BP1-201ENST00000519377 943 ntBASIC4.7□□□□□ -1.66
CHD7Q9P2D1 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 SNORA51-201ENST00000606420 132 ntBASIC4.7□□□□□ -1.66
CHD7Q9P2D1 OR7A19P-201ENST00000608051 733 ntBASIC4.7□□□□□ -1.66
CHD7Q9P2D1 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 NDUFB4P4-201ENST00000404822 243 ntBASIC4.7□□□□□ -1.66
CHD7Q9P2D1 RPS29P7-201ENST00000439662 171 ntBASIC4.7□□□□□ -1.66
CHD7Q9P2D1 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.7□□□□□ -1.66
CHD7Q9P2D1 MTND4LP31-201ENST00000514859 294 ntBASIC4.7□□□□□ -1.66
CHD7Q9P2D1 IPO5P1-202ENST00000600039 287 ntBASIC4.7□□□□□ -1.66
CHD7Q9P2D1 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms