Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL20A1Q9P218 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL20A1Q9P218 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL20A1Q9P218 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL20A1Q9P218 RNA5SP123-201ENST00000363244 119 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL20A1Q9P218 RNU6-1005P-201ENST00000384519 107 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 ATF1P1-201ENST00000406040 927 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL20A1Q9P218 AL035458.1-201ENST00000433096 585 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 AC020898.1-201ENST00000474167 787 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 RPL7P41-201ENST00000485823 957 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 HMGB1P38-201ENST00000490557 577 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL20A1Q9P218 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 SNORA31.13-201ENST00000516624 135 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 AC011840.5-201ENST00000582125 771 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 MIR4691-201ENST00000583764 85 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 BNIP3P38-201ENST00000601117 544 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 AC011626.1-201ENST00000604710 562 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 AC099785.1-201ENST00000605697 437 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 AC012557.1-201ENST00000607115 611 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 AP005432.2-201ENST00000608162 586 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 AC010632.3-201ENST00000611377 369 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 AL109659.3-201ENST00000624985 950 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL20A1Q9P218 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.93□□□□□ -1.46
COL20A1Q9P218 CDC27P2-201ENST00000425026 1922 ntBASIC5.93□□□□□ -1.46
COL20A1Q9P218 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL20A1Q9P218 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL20A1Q9P218 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL20A1Q9P218 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL20A1Q9P218 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL20A1Q9P218 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL20A1Q9P218 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL20A1Q9P218 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL20A1Q9P218 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 MIR585-201ENST00000384887 94 ntBASIC5.92□□□□□ -1.46
COL20A1Q9P218 ZNF602P-201ENST00000405929 924 ntBASIC5.92□□□□□ -1.46
COL20A1Q9P218 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL20A1Q9P218 AC138761.5-201ENST00000433967 325 ntBASIC5.92□□□□□ -1.46
COL20A1Q9P218 MED6P1-201ENST00000439659 713 ntBASIC5.92□□□□□ -1.46
COL20A1Q9P218 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 AC092685.1-201ENST00000447960 1243 ntBASIC5.92□□□□□ -1.46
COL20A1Q9P218 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 AC021205.1-201ENST00000468797 348 ntBASIC5.92□□□□□ -1.46
COL20A1Q9P218 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL20A1Q9P218 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 IGLV2-34-201ENST00000490007 283 ntBASIC5.92□□□□□ -1.46
COL20A1Q9P218 AC010374.1-201ENST00000503762 1237 ntBASIC5.92□□□□□ -1.46
COL20A1Q9P218 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL20A1Q9P218 AC006427.1-201ENST00000514359 712 ntBASIC5.92□□□□□ -1.46
COL20A1Q9P218 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 RNU6-1308P-201ENST00000516817 103 ntBASIC5.92□□□□□ -1.46
COL20A1Q9P218 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 AC034205.1-201ENST00000520621 638 ntBASIC5.92□□□□□ -1.46
COL20A1Q9P218 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 AP000676.2-201ENST00000529711 301 ntBASIC5.92□□□□□ -1.46
COL20A1Q9P218 CYB5AP5-201ENST00000549779 389 ntBASIC5.92□□□□□ -1.46
COL20A1Q9P218 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 RPP40P2-201ENST00000603596 712 ntBASIC5.92□□□□□ -1.46
COL20A1Q9P218 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL20A1Q9P218 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.92□□□□□ -1.46
COL20A1Q9P218 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL20A1Q9P218 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms