Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AC024023.1-201ENST00000624530 922 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AC073869.10-201ENST00000642016 354 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 DDX18P4-201ENST00000511690 1966 ntBASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.67□□□□□ -1.5
BLOC1S4Q9NUP1 AL445437.1-201ENST00000623157 3087 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 SNURFL-201ENST00000309296 343 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 U8.4-201ENST00000363626 134 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AL353692.2-201ENST00000407054 335 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 RNU2-17P-201ENST00000410290 190 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AC211486.3-201ENST00000412694 621 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AC048351.1-201ENST00000420064 602 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AC073508.1-201ENST00000428866 656 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 PTP4A1P3-201ENST00000433661 420 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AL450023.3-201ENST00000440592 271 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 EEF1B2P5-201ENST00000444820 548 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 MTND2P6-201ENST00000455337 1030 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 RPS17P2-201ENST00000461663 408 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 ENPP7P11-201ENST00000505915 627 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AC093014.1-201ENST00000548926 724 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AL109741.3-201ENST00000561748 592 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AP004607.9-201ENST00000618202 316 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 AC020923.1-201ENST00000624021 917 ntBASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
BLOC1S4Q9NUP1 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 AC068446.1-201ENST00000556425 1549 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 RN7SKP113-201ENST00000363891 295 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 RNU6-452P-201ENST00000384406 107 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 U3.23-201ENST00000391132 200 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 PCNPP4-201ENST00000414817 517 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 MTCO1P52-201ENST00000433928 531 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 RPS29P9-201ENST00000440360 171 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 TXNP5-201ENST00000441043 315 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 IGHV5-78-201ENST00000450948 295 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 RN7SL799P-201ENST00000475891 298 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 RPS18P6-201ENST00000476880 458 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 AC138832.1-201ENST00000522871 556 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 AC012339.2-201ENST00000523996 453 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 NOP10-202ENST00000557912 436 ntTSL 2 BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 AC105254.2-201ENST00000603636 436 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 AL139407.1-201ENST00000613826 1175 ntBASIC5.65□□□□□ -1.5
BLOC1S4Q9NUP1 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms