Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 BMS1P3-201ENST00000372011 932 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 SNORA70.6-201ENST00000383934 134 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 SNORD116-9-201ENST00000384000 95 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 RNU1-136P-201ENST00000384181 164 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 SNORD116-3-201ENST00000384287 95 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 RNA5SP187-201ENST00000384400 119 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 SNORD116-7-201ENST00000384404 95 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 SNORD116-5-201ENST00000384462 95 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 Z75741.2-201ENST00000417272 1167 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 SEPT2P1-201ENST00000419651 180 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 RAC1P8-201ENST00000427086 527 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 MOB1AP1-201ENST00000430903 535 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AL590399.4-201ENST00000436561 601 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 GSTA7P-201ENST00000438425 448 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 RPL31P15-201ENST00000449770 338 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC234781.3-201ENST00000452540 973 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 PPIAP27-201ENST00000453800 265 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 MTND2P28-201ENST00000457540 1044 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC107015.1-201ENST00000466902 747 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 RN7SL177P-201ENST00000476596 299 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 TMEM97P2-201ENST00000517841 403 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AP005136.1-201ENST00000579765 429 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC008507.3-201ENST00000585753 472 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC145423.1-201ENST00000605712 336 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AL022394.1-201ENST00000606979 292 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AL021707.7-201ENST00000607991 416 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AL162574.1-201ENST00000615702 950 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 MIR6826-201ENST00000617808 98 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC007490.1-201ENST00000624321 703 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC073488.3-201ENST00000631611 778 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC007671.2-201ENST00000637344 619 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC103706.2-201ENST00000638080 240 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC012254.3-201ENST00000591183 2117 ntBASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.38□□□□□ -1.55
AMBRA1Q9C0C7 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC073055.1-201ENST00000456901 1621 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC002525.1-201ENST00000624392 1622 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC006206.1-201ENST00000544842 3387 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 SELENOWP1-201ENST00000322792 252 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 FAM133CP-201ENST00000332869 704 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 RNU6-353P-201ENST00000364266 108 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 SNORD116.1-201ENST00000365628 92 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AL031985.1-201ENST00000392713 418 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 OR4K6P-201ENST00000416478 897 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC005345.1-201ENST00000431868 217 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC090018.1-201ENST00000434369 367 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC096638.2-201ENST00000434965 711 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC023141.8-201ENST00000442554 208 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 AC233982.1-201ENST00000451247 436 ntBASIC5.37□□□□□ -1.55
AMBRA1Q9C0C7 CFL1P4-201ENST00000451536 498 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 734.2 ms