Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 MIR383-201ENST00000362257 73 ntBASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 AC233289.1-201ENST00000403700 508 ntBASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 AC114814.2-201ENST00000419195 485 ntBASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 RPS29P17-201ENST00000430795 166 ntBASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 AC245028.2-201ENST00000458673 253 ntBASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 F11-205ENST00000492972 1204 ntTSL 2 BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 RNA5SP116-201ENST00000516132 98 ntBASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 AC107016.1-201ENST00000550463 337 ntBASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 AC008739.3-201ENST00000603262 127 ntBASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 NBPF12-203ENST00000611443 5594 ntTSL 5 BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 AP001273.1-201ENST00000624493 3152 ntBASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
SHANK3Q9BYB0 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
SHANK3Q9BYB0 RN7SKP202-201ENST00000410439 330 ntBASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 AL162591.2-201ENST00000449634 317 ntBASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 RN7SL691P-201ENST00000494487 301 ntBASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 AC093014.1-201ENST00000548926 724 ntBASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 AC015912.2-201ENST00000571053 181 ntBASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 RN7SL176P-201ENST00000580352 264 ntBASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 AL023881.1-201ENST00000621088 301 ntBASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 AL034370.1-201ENST00000397254 1590 ntBASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 AL356095.1-201ENST00000417217 199 ntBASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 DHFRP3-201ENST00000455595 559 ntBASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 SNORA31.9-201ENST00000516429 84 ntBASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.02□□□□□ -1.45
SHANK3Q9BYB0 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 ARL4AP4-201ENST00000434170 518 ntBASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 NUTF2P3-201ENST00000448540 384 ntBASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 AC005868.1-201ENST00000536421 331 ntBASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 AC073137.1-201ENST00000605636 634 ntBASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 AC020634.1-201ENST00000608701 549 ntBASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 MIR6891-201ENST00000618788 93 ntBASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.01□□□□□ -1.45
SHANK3Q9BYB0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SHANK3Q9BYB0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SHANK3Q9BYB0 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC6□□□□□ -1.45
SHANK3Q9BYB0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6□□□□□ -1.45
SHANK3Q9BYB0 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6□□□□□ -1.45
SHANK3Q9BYB0 AL731532.1-201ENST00000623972 4236 ntBASIC6□□□□□ -1.45
SHANK3Q9BYB0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6□□□□□ -1.45
SHANK3Q9BYB0 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC6□□□□□ -1.45
SHANK3Q9BYB0 RNA5SP366-201ENST00000365454 123 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms