Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.55□□□□□ -1.68
SSX3Q99909 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SSX3Q99909 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX3Q99909 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX3Q99909 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX3Q99909 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.55□□□□□ -1.68
SSX3Q99909 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX3Q99909 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.55□□□□□ -1.68
SSX3Q99909 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SSX3Q99909 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.54□□□□□ -1.68
SSX3Q99909 AC096656.1-201ENST00000623826 1364 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.54□□□□□ -1.68
SSX3Q99909 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.54□□□□□ -1.68
SSX3Q99909 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX3Q99909 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSX3Q99909 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSX3Q99909 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX3Q99909 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSX3Q99909 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX3Q99909 AC024341.1-201ENST00000526444 1552 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX3Q99909 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX3Q99909 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SSX3Q99909 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSX3Q99909 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX3Q99909 LINC01109-201ENST00000603837 3081 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 RN7SKP160-201ENST00000363804 340 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 RNU4-2-201ENST00000365668 141 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX3Q99909 AC005522.1-201ENST00000395416 346 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 AL078599.1-201ENST00000402075 293 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 RPS24P12-201ENST00000402084 394 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 AL359643.1-201ENST00000404109 423 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 AC105402.1-201ENST00000413336 545 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 AL357078.2-201ENST00000416486 427 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 AL138785.1-201ENST00000425821 331 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX3Q99909 AL359265.1-201ENST00000440296 795 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 AL513321.1-201ENST00000441175 761 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 LINC02210-201ENST00000444561 288 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.54□□□□□ -1.68
SSX3Q99909 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.54□□□□□ -1.68
SSX3Q99909 HMGB1P26-201ENST00000452520 628 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX3Q99909 AP000797.2-201ENST00000475768 606 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 SIAH1P1-201ENST00000479411 923 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 AC107398.1-201ENST00000486904 505 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.54□□□□□ -1.68
SSX3Q99909 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.54□□□□□ -1.68
SSX3Q99909 DUTP7-201ENST00000507982 486 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.54□□□□□ -1.68
SSX3Q99909 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX3Q99909 BX510359.5-201ENST00000515651 304 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 RN7SKP99-201ENST00000517028 307 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.54□□□□□ -1.68
SSX3Q99909 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.54□□□□□ -1.68
SSX3Q99909 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX3Q99909 PDCD5P1-201ENST00000543528 309 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX3Q99909 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.54□□□□□ -1.68
SSX3Q99909 AC015720.2-201ENST00000567709 334 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.54□□□□□ -1.68
SSX3Q99909 MIR548Y-201ENST00000582739 110 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.54□□□□□ -1.68
SSX3Q99909 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSX3Q99909 AC017076.1-201ENST00000607613 578 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX3Q99909 AC010632.3-201ENST00000611377 369 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 LINC00901.1-201ENST00000617252 152 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.54□□□□□ -1.68
SSX3Q99909 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX3Q99909 OR2L1P-202ENST00000641567 1023 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SSX3Q99909 OR14L1P-202ENST00000641545 3009 ntBASIC4.54□□□□□ -1.68
SSX3Q99909 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SSX3Q99909 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SSX3Q99909 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SSX3Q99909 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SSX3Q99909 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX3Q99909 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
SSX3Q99909 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSX3Q99909 CIR1P2-201ENST00000514821 1342 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SSX3Q99909 PWAR1-201ENST00000624188 2414 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX3Q99909 RNA5SP319-201ENST00000362768 119 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 RNU6-185P-201ENST00000384421 107 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 AL391361.1-201ENST00000405580 489 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 MIR1271-201ENST00000408537 86 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SSX3Q99909 AC073069.1-201ENST00000428657 441 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 PPIAP13-201ENST00000434706 478 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 AC012075.1-201ENST00000436549 580 ntBASIC4.53□□□□□ -1.68
SSX3Q99909 AC006335.2-201ENST00000437993 330 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 207.5 ms