Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RN7SKP16-201ENST00000410180 299 ntBASIC7.69□□□□□ -1.18
IFT140Q96RY7 RPL37P1-201ENST00000432310 284 ntBASIC7.69□□□□□ -1.18
IFT140Q96RY7 AC006326.1-201ENST00000445465 787 ntBASIC7.69□□□□□ -1.18
IFT140Q96RY7 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC7.69□□□□□ -1.18
IFT140Q96RY7 VN1R105P-201ENST00000486595 910 ntBASIC7.69□□□□□ -1.18
IFT140Q96RY7 AC090515.3-201ENST00000560431 315 ntBASIC7.69□□□□□ -1.18
IFT140Q96RY7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC7.69□□□□□ -1.18
IFT140Q96RY7 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC7.69□□□□□ -1.18
IFT140Q96RY7 MIR6867-201ENST00000610636 67 ntBASIC7.69□□□□□ -1.18
IFT140Q96RY7 AC007786.3-201ENST00000615154 596 ntBASIC7.69□□□□□ -1.18
IFT140Q96RY7 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
IFT140Q96RY7 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.69□□□□□ -1.18
IFT140Q96RY7 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC7.69□□□□□ -1.18
IFT140Q96RY7 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
IFT140Q96RY7 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
IFT140Q96RY7 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
IFT140Q96RY7 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
IFT140Q96RY7 AC008033.1-201ENST00000216407 1162 ntBASIC7.68□□□□□ -1.18
IFT140Q96RY7 RNU6-525P-201ENST00000363685 104 ntBASIC7.68□□□□□ -1.18
IFT140Q96RY7 ARL4AP5-201ENST00000404372 599 ntBASIC7.68□□□□□ -1.18
IFT140Q96RY7 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC7.68□□□□□ -1.18
IFT140Q96RY7 RN7SL691P-201ENST00000494487 301 ntBASIC7.68□□□□□ -1.18
IFT140Q96RY7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC7.68□□□□□ -1.18
IFT140Q96RY7 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC7.68□□□□□ -1.18
IFT140Q96RY7 SCARNA13-201ENST00000516672 275 ntBASIC7.68□□□□□ -1.18
IFT140Q96RY7 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC7.68□□□□□ -1.18
IFT140Q96RY7 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC7.68□□□□□ -1.18
IFT140Q96RY7 AL162574.1-201ENST00000615702 950 ntBASIC7.68□□□□□ -1.18
IFT140Q96RY7 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC7.68□□□□□ -1.18
IFT140Q96RY7 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
IFT140Q96RY7 AC006453.5-201ENST00000636451 619 ntBASIC7.68□□□□□ -1.18
IFT140Q96RY7 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
IFT140Q96RY7 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
IFT140Q96RY7 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
IFT140Q96RY7 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC7.68□□□□□ -1.18
IFT140Q96RY7 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
IFT140Q96RY7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
IFT140Q96RY7 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC7.68□□□□□ -1.18
IFT140Q96RY7 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
IFT140Q96RY7 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
IFT140Q96RY7 AC018628.1-201ENST00000624147 3819 ntBASIC7.68□□□□□ -1.18
IFT140Q96RY7 AC108467.2-201ENST00000617640 1597 ntBASIC7.68□□□□□ -1.18
IFT140Q96RY7 RPS3AP25-201ENST00000411660 793 ntBASIC7.68□□□□□ -1.18
IFT140Q96RY7 RPL23AP38-201ENST00000423801 469 ntBASIC7.68□□□□□ -1.18
IFT140Q96RY7 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC7.68□□□□□ -1.18
IFT140Q96RY7 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC7.68□□□□□ -1.18
IFT140Q96RY7 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC7.68□□□□□ -1.18
IFT140Q96RY7 RPS27AP13-201ENST00000498403 237 ntBASIC7.68□□□□□ -1.18
IFT140Q96RY7 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC7.68□□□□□ -1.18
IFT140Q96RY7 TMEM30CP-203ENST00000637814 1035 ntBASIC7.68□□□□□ -1.18
IFT140Q96RY7 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC7.68□□□□□ -1.18
IFT140Q96RY7 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.67□□□□□ -1.18
IFT140Q96RY7 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.67□□□□□ -1.18
IFT140Q96RY7 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
IFT140Q96RY7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC7.67□□□□□ -1.18
IFT140Q96RY7 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
IFT140Q96RY7 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
IFT140Q96RY7 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
IFT140Q96RY7 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
IFT140Q96RY7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
IFT140Q96RY7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
IFT140Q96RY7 RNA5SP372-201ENST00000390836 115 ntBASIC7.67□□□□□ -1.18
IFT140Q96RY7 PTMAP2-201ENST00000397627 327 ntBASIC7.67□□□□□ -1.18
IFT140Q96RY7 AL607077.1-201ENST00000401718 499 ntBASIC7.67□□□□□ -1.18
IFT140Q96RY7 RN7SKP159-201ENST00000410657 292 ntBASIC7.67□□□□□ -1.18
IFT140Q96RY7 MTND4LP17-201ENST00000414607 293 ntBASIC7.67□□□□□ -1.18
IFT140Q96RY7 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
IFT140Q96RY7 RPL7P33-201ENST00000444159 742 ntBASIC7.67□□□□□ -1.18
IFT140Q96RY7 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC7.67□□□□□ -1.18
IFT140Q96RY7 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC7.67□□□□□ -1.18
IFT140Q96RY7 RN7SKP67-201ENST00000515905 235 ntBASIC7.67□□□□□ -1.18
IFT140Q96RY7 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC7.67□□□□□ -1.18
IFT140Q96RY7 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC7.67□□□□□ -1.18
IFT140Q96RY7 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC7.67□□□□□ -1.18
IFT140Q96RY7 AC113403.1-201ENST00000604910 193 ntBASIC7.67□□□□□ -1.18
IFT140Q96RY7 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.67□□□□□ -1.18
IFT140Q96RY7 AC140479.6-201ENST00000633535 357 ntBASIC7.67□□□□□ -1.18
IFT140Q96RY7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
IFT140Q96RY7 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
IFT140Q96RY7 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC7.66□□□□□ -1.18
IFT140Q96RY7 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
IFT140Q96RY7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
IFT140Q96RY7 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.66□□□□□ -1.18
IFT140Q96RY7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC7.66□□□□□ -1.18
IFT140Q96RY7 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
IFT140Q96RY7 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
IFT140Q96RY7 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
IFT140Q96RY7 AL359955.1-201ENST00000455242 3275 ntBASIC7.66□□□□□ -1.18
IFT140Q96RY7 AL121950.1-201ENST00000624993 2077 ntBASIC7.66□□□□□ -1.18
IFT140Q96RY7 AL031119.1-201ENST00000404707 1879 ntBASIC7.66□□□□□ -1.18
IFT140Q96RY7 AC245028.2-201ENST00000458673 253 ntBASIC7.66□□□□□ -1.18
IFT140Q96RY7 AC026726.1-201ENST00000512859 601 ntBASIC7.66□□□□□ -1.18
IFT140Q96RY7 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC7.66□□□□□ -1.18
IFT140Q96RY7 RN7SL600P-201ENST00000581811 299 ntBASIC7.66□□□□□ -1.18
IFT140Q96RY7 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
IFT140Q96RY7 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
IFT140Q96RY7 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
IFT140Q96RY7 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.65□□□□□ -1.18
IFT140Q96RY7 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
IFT140Q96RY7 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms