Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC073916.1-201ENST00000545095 130 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC092121.1-201ENST00000569452 202 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC011260.1-201ENST00000578420 472 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC020916.2-201ENST00000591242 360 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC007684.1-201ENST00000609671 477 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AL159169.2-201ENST00000610061 1269 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 MIR6809-201ENST00000612189 116 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AL136228.1-201ENST00000622221 319 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AF001550.2-201ENST00000636643 217 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 GUCY1B2-204ENST00000531898 1979 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC007342.7-201ENST00000624610 2337 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AP002833.3-201ENST00000625075 2265 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 HSPD1P7-201ENST00000447985 1686 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AP000776.1-201ENST00000530032 1663 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 OLMALINC-203ENST00000641087 3779 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC010132.2-201ENST00000295493 1043 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 RNU6-1042P-201ENST00000384204 107 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 MIR142-201ENST00000384835 87 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 MIR1203-201ENST00000408812 85 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 NENFP1-201ENST00000419476 466 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 RPA2P2-201ENST00000419698 796 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 RPS27AP7-201ENST00000422792 455 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AL022400.1-201ENST00000423946 935 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 SRSF1P1-201ENST00000424058 520 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC009784.1-201ENST00000426484 460 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 CCNB1IP1P2-201ENST00000432876 818 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 VN1R54P-201ENST00000435210 1049 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 USP9YP29-201ENST00000445112 563 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 VN1R34P-201ENST00000447387 883 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 HMGB3P13-201ENST00000511263 607 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC114781.3-201ENST00000512083 142 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AP001317.1-201ENST00000531194 960 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 ZNF519P3-201ENST00000557158 1032 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 ELOCP28-201ENST00000590044 317 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AP001542.2-201ENST00000593141 364 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AL731566.2-201ENST00000618971 317 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC010435.1-201ENST00000623353 1177 ntBASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
SYNGAP1Q96PV0 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AL033543.1-201ENST00000623440 13454 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 AC009831.5-201ENST00000624000 3189 ntBASIC7□□□□□ -1.29
SYNGAP1Q96PV0 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7□□□□□ -1.29
SYNGAP1Q96PV0 PSG10P-201ENST00000501199 1500 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms