Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 AC000374.1-201ENST00000434698 1745 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTP4Q96DX8 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTP4Q96DX8 SNORA17.1-201ENST00000362945 126 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 RNU1-43P-201ENST00000365052 165 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTP4Q96DX8 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTP4Q96DX8 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTP4Q96DX8 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 RNU1-106P-201ENST00000384382 164 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 MIR600-201ENST00000385007 98 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 AL645733.1-201ENST00000402250 217 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 SNORA77-201ENST00000408716 125 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 RN7SKP114-201ENST00000410327 279 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 AC013429.2-201ENST00000418798 781 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 AL121882.1-201ENST00000422893 417 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 AL392003.1-201ENST00000434394 243 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 TXNP5-201ENST00000441043 315 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 TPTE2P3-201ENST00000441562 1189 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 AC104849.1-201ENST00000462623 405 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 SNRPCP2-201ENST00000504370 475 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 ENPP7P9-201ENST00000514456 627 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 EIF4A2P5-201ENST00000529914 499 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 RN7SL339P-201ENST00000580597 296 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 KATNBL1P5-201ENST00000605015 517 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 TAS2R6P-201ENST00000605022 826 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 AC009163.6-201ENST00000612367 342 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 AP000943.4-201ENST00000622912 357 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 AC004808.1-201ENST00000627671 721 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTP4Q96DX8 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTP4Q96DX8 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTP4Q96DX8 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.18□□□□□ -1.58
RTP4Q96DX8 CASC19-261ENST00000641853 1638 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTP4Q96DX8 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTP4Q96DX8 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTP4Q96DX8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RTP4Q96DX8 AL645568.2-201ENST00000432815 1337 ntBASIC5.18□□□□□ -1.58
RTP4Q96DX8 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RTP4Q96DX8 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
RTP4Q96DX8 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 AL672167.1-204ENST00000641875 3017 ntBASIC5.17□□□□□ -1.58
RTP4Q96DX8 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 LRRC37BP1-201ENST00000398851 714 ntBASIC5.17□□□□□ -1.58
RTP4Q96DX8 AL589647.1-201ENST00000402485 466 ntBASIC5.17□□□□□ -1.58
RTP4Q96DX8 DUTP5-201ENST00000406790 469 ntBASIC5.17□□□□□ -1.58
RTP4Q96DX8 RNU6-584P-201ENST00000410350 95 ntBASIC5.17□□□□□ -1.58
RTP4Q96DX8 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 ELOCP3-201ENST00000439303 348 ntBASIC5.17□□□□□ -1.58
RTP4Q96DX8 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 XKRY2-201ENST00000442362 1093 ntBASIC5.17□□□□□ -1.58
RTP4Q96DX8 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 AC016687.1-201ENST00000482574 353 ntBASIC5.17□□□□□ -1.58
RTP4Q96DX8 RN7SL97P-201ENST00000486780 299 ntBASIC5.17□□□□□ -1.58
RTP4Q96DX8 MTCO2P9-201ENST00000503214 694 ntBASIC5.17□□□□□ -1.58
RTP4Q96DX8 AC096571.1-202ENST00000506634 735 ntBASIC5.17□□□□□ -1.58
RTP4Q96DX8 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
RTP4Q96DX8 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 AC093510.2-201ENST00000562820 896 ntBASIC5.17□□□□□ -1.58
RTP4Q96DX8 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 AC013244.3-201ENST00000605614 388 ntBASIC5.17□□□□□ -1.58
RTP4Q96DX8 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
RTP4Q96DX8 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms