Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC009950.2-201ENST00000636548 183 ntBASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.85□□□□□ -1.63
ECHDC3Q96DC8 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 AC053481.2-202ENST00000582394 1500 ntBASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 AC073429.2-201ENST00000569694 1444 ntBASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 RSU1P3-201ENST00000412878 835 ntBASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 MTND4LP21-201ENST00000415303 295 ntBASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 BX510359.2-201ENST00000417920 305 ntBASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 OR2B7P-201ENST00000429302 934 ntBASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 RPS17P8-201ENST00000434525 335 ntBASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 AL772161.1-201ENST00000439130 476 ntBASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 RPL36AP15-201ENST00000444514 266 ntBASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 GYG1P1-201ENST00000460864 698 ntBASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 RPL7AP10-201ENST00000481016 791 ntBASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 AC011005.3-201ENST00000491624 395 ntBASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 LSM3P2-201ENST00000551246 273 ntBASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 FAM27B-201ENST00000610601 213 ntBASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 AP003400.2-201ENST00000624036 666 ntBASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ECHDC3Q96DC8 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
ECHDC3Q96DC8 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
ECHDC3Q96DC8 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 RN7SKP103-201ENST00000363848 320 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 RNU6-1320P-201ENST00000390838 107 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 RNU6-1269P-201ENST00000391139 107 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 TMBIM7P-201ENST00000418074 855 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 VN1R37P-201ENST00000419096 748 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 GLUD1P9-201ENST00000420997 1173 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AC106901.1-201ENST00000425086 698 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AL451139.1-201ENST00000434718 346 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AC005154.2-201ENST00000438110 379 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AL157385.1-201ENST00000446973 268 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 RNU6-599P-201ENST00000459383 107 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 RNU6-1193P-201ENST00000459461 107 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 OR9N1P-201ENST00000491296 333 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AC069304.1-201ENST00000491593 704 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AC023424.1-201ENST00000496058 459 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 RPS27AP18-201ENST00000515536 459 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 RN7SKP276-201ENST00000516242 268 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 OR8A2P-201ENST00000528631 952 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AC067838.1-201ENST00000606064 577 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AL159169.2-201ENST00000610061 1269 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AC100827.5-201ENST00000615883 426 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 RNU6-368P-201ENST00000620928 107 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 RNU6-538P-201ENST00000622329 107 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 CUL4AP1-201ENST00000514750 1863 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 AC007382.1-201ENST00000624376 2618 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 ZFRP1-201ENST00000457579 2970 ntBASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
ECHDC3Q96DC8 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 AL606537.1-201ENST00000607258 2011 ntBASIC4.82□□□□□ -1.64
ECHDC3Q96DC8 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms