Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 RN7SL517P-201ENST00000462240 305 ntBASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 RN7SKP92-201ENST00000517266 244 ntBASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 KARSP3-201ENST00000571212 1504 ntBASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.9□□□□□ -1.63
SHROOM3Q8TF72 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 FABP7P1-201ENST00000424004 391 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AC097523.2-201ENST00000435551 652 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AC068993.1-201ENST00000546724 589 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AC009852.2-201ENST00000567898 485 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AC015912.2-201ENST00000571053 181 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AC099654.2-201ENST00000433031 1980 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AC010266.2-201ENST00000564741 3255 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AL672167.1-203ENST00000641299 2975 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AL136116.2-201ENST00000404020 785 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 NUDT19P3-201ENST00000404698 555 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 GLUD1P9-201ENST00000420997 1173 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 OR2AM1P-201ENST00000422137 422 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 OR2AH1P-201ENST00000425717 928 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 HMGN2P27-201ENST00000427352 270 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 RNA5SP103-201ENST00000459503 118 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AC104763.1-201ENST00000475274 360 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AC069304.1-201ENST00000491593 704 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 SNORA74C-1-201ENST00000580726 201 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 BNIP3P33-201ENST00000598912 569 ntBASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
SHROOM3Q8TF72 PCAT14-202ENST00000627127 3935 ntBASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 U3.23-201ENST00000391132 200 ntBASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 SNORA11C-201ENST00000408532 129 ntBASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 ATG4AP1-201ENST00000416893 538 ntBASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 NPM1P33-201ENST00000438918 872 ntBASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 CYCSP29-201ENST00000533731 318 ntBASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 AP006289.1-201ENST00000538089 277 ntBASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 AC008033.2-201ENST00000542626 177 ntBASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.88□□□□□ -1.63
SHROOM3Q8TF72 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 AL672167.1-205ENST00000641112 3080 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 OR8G5-201ENST00000524943 1041 ntBASIC4.87□□□□□ -1.63
SHROOM3Q8TF72 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms