Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 VN1R37P-201ENST00000419096 748 ntBASIC5.75□□□□□ -1.49
SNED1Q8TER0 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 AL136231.1-201ENST00000429407 730 ntBASIC5.75□□□□□ -1.49
SNED1Q8TER0 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 AC044797.1-201ENST00000445744 679 ntBASIC5.75□□□□□ -1.49
SNED1Q8TER0 AL359073.1-201ENST00000448036 403 ntBASIC5.75□□□□□ -1.49
SNED1Q8TER0 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 RNU6-709P-201ENST00000517257 104 ntBASIC5.75□□□□□ -1.49
SNED1Q8TER0 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 HNRNPRP2-201ENST00000528421 743 ntBASIC5.75□□□□□ -1.49
SNED1Q8TER0 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNED1Q8TER0 AC025884.1-201ENST00000556034 378 ntBASIC5.75□□□□□ -1.49
SNED1Q8TER0 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 U3.53-201ENST00000628922 216 ntBASIC5.75□□□□□ -1.49
SNED1Q8TER0 AP001153.1-201ENST00000641024 338 ntBASIC5.75□□□□□ -1.49
SNED1Q8TER0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNED1Q8TER0 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 IQCB2P-201ENST00000401788 1633 ntBASIC5.75□□□□□ -1.49
SNED1Q8TER0 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNED1Q8TER0 ZNF137P-201ENST00000456718 1920 ntBASIC5.75□□□□□ -1.49
SNED1Q8TER0 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
SNED1Q8TER0 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
SNED1Q8TER0 AC093297.3-201ENST00000607056 2517 ntBASIC5.75□□□□□ -1.49
SNED1Q8TER0 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.75□□□□□ -1.49
SNED1Q8TER0 MIR23A-201ENST00000385245 73 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNED1Q8TER0 AL389915.1-201ENST00000422463 466 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNED1Q8TER0 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNED1Q8TER0 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 AC015795.1-201ENST00000513669 327 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 MRPL49P2-201ENST00000521066 465 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 AC026616.1-201ENST00000523157 525 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 OOSP1P2-201ENST00000579644 351 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 AC026790.2-201ENST00000606282 430 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 PLSCR2-207ENST00000613069 1208 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNED1Q8TER0 ZYXP1-201ENST00000617638 118 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 AP000843.1-201ENST00000624880 701 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 UGT2B26P-201ENST00000508672 1613 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNED1Q8TER0 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNED1Q8TER0 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 AC092376.2-201ENST00000622621 4116 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNED1Q8TER0 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNED1Q8TER0 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
SNED1Q8TER0 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 AL731566.1-201ENST00000620490 1937 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
SNED1Q8TER0 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 RN7SKP280-201ENST00000364196 304 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 SNORA70C-201ENST00000384538 135 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 AL590762.2-201ENST00000395798 571 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 RPS21P8-201ENST00000413365 247 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 RPL7P57-201ENST00000423238 740 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 AL158073.1-201ENST00000426848 1104 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 KATNBL1P2-201ENST00000433311 835 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 RN7SL817P-201ENST00000480777 288 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 AC073073.1-201ENST00000493920 463 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 AC020593.1-201ENST00000507399 299 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 Y_RNA.719-201ENST00000517156 106 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 IGKV3OR22-2-201ENST00000517943 313 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 AL023881.1-201ENST00000621088 301 ntBASIC5.74□□□□□ -1.49
SNED1Q8TER0 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.74□□□□□ -1.49
SNED1Q8TER0 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
SNED1Q8TER0 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNED1Q8TER0 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
SNED1Q8TER0 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
SNED1Q8TER0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
SNED1Q8TER0 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms