Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC104687.2-201ENST00000604442 342 ntBASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC087783.2-201ENST00000605070 562 ntBASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC28Q86X40 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC28Q86X40 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC28Q86X40 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
LRRC28Q86X40 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC28Q86X40 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
LRRC28Q86X40 CASC19-281ENST00000642118 1554 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 THAP12P8-201ENST00000447914 2115 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 AC093775.1-201ENST00000624154 1868 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 SNURFL-201ENST00000309296 343 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 RNU1-20P-201ENST00000363314 162 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 SNORA58B-201ENST00000364259 136 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 HDGFP1-201ENST00000405943 252 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 RNU6ATAC7P-201ENST00000408111 127 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 AC007394.1-201ENST00000421941 531 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 RPL7AP28-201ENST00000464513 571 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 RN7SL41P-201ENST00000476144 297 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 RPL23AP37-201ENST00000479658 549 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 RN7SL244P-201ENST00000493405 297 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 AC004980.4-201ENST00000513375 203 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 RN7SKP147-201ENST00000517154 244 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 Y_RNA.719-201ENST00000517156 106 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 MIR4646-201ENST00000580775 63 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 AC026979.4-201ENST00000606555 645 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 AC091979.2-201ENST00000607514 214 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 AC079298.2-201ENST00000623885 459 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 AC104118.1-201ENST00000607625 1589 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
LRRC28Q86X40 EOGT-210ENST00000615922 1931 ntBASIC4.31□□□□□ -1.72
LRRC28Q86X40 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
LRRC28Q86X40 NXF4-202ENST00000416098 1465 ntBASIC4.3□□□□□ -1.72
LRRC28Q86X40 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRC28Q86X40 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRC28Q86X40 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
LRRC28Q86X40 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRC28Q86X40 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRC28Q86X40 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
LRRC28Q86X40 OR52B1P-201ENST00000316506 909 ntBASIC4.3□□□□□ -1.72
LRRC28Q86X40 RNU4-4P-201ENST00000364588 130 ntBASIC4.3□□□□□ -1.72
LRRC28Q86X40 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.3□□□□□ -1.72
LRRC28Q86X40 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.3□□□□□ -1.72
LRRC28Q86X40 RN7SKP114-201ENST00000410327 279 ntBASIC4.3□□□□□ -1.72
LRRC28Q86X40 PDSS1P1-201ENST00000422953 1114 ntBASIC4.3□□□□□ -1.72
LRRC28Q86X40 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRC28Q86X40 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.3□□□□□ -1.72
LRRC28Q86X40 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.3□□□□□ -1.72
LRRC28Q86X40 AC004938.1-201ENST00000438468 308 ntBASIC4.3□□□□□ -1.72
LRRC28Q86X40 RPS29P9-201ENST00000440360 171 ntBASIC4.3□□□□□ -1.72
LRRC28Q86X40 HMGB1P4-201ENST00000455362 567 ntBASIC4.3□□□□□ -1.72
LRRC28Q86X40 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRC28Q86X40 EIF2S2P5-201ENST00000457635 968 ntBASIC4.3□□□□□ -1.72
LRRC28Q86X40 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.3□□□□□ -1.72
LRRC28Q86X40 HMGN2P25-201ENST00000486956 268 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms