Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC009852.2-201ENST00000567898 485 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC008088.1-201ENST00000580993 280 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 FKBP1AP1-201ENST00000594588 318 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC245036.5-201ENST00000596330 847 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AL606834.3-201ENST00000602615 496 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AP005432.2-201ENST00000608162 586 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC004817.4-201ENST00000602396 3625 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 AC235565.1-201ENST00000456962 1325 ntBASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.15□□□□□ -1.59
ZNF549Q6P9A3 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 MIR323B-201ENST00000385269 82 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 U3.25-201ENST00000391209 220 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 OR8V1P-201ENST00000395193 873 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 NPM1P38-201ENST00000403835 865 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AL512422.1-201ENST00000407033 553 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 RN7SKP59-201ENST00000410520 314 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 ARL2BPP3-201ENST00000421226 480 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 CHEK2P5-201ENST00000423877 246 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 RPS4XP16-201ENST00000427198 791 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AL121776.1-201ENST00000429337 372 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 VN1R108P-201ENST00000431580 830 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 CFL1P1-202ENST00000432948 411 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AL161722.2-201ENST00000434731 981 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AL391987.1-201ENST00000441025 200 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 Z99127.2-201ENST00000441426 334 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 RPS11P7-201ENST00000442125 465 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AL591719.1-201ENST00000444669 744 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 RNU7-157P-201ENST00000459600 66 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AL136038.1-201ENST00000497246 351 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 PCNAP1-201ENST00000505363 709 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 RPS4XP20-201ENST00000505751 772 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AC010376.1-201ENST00000522101 334 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 OR5D2P-201ENST00000524390 911 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AC005000.1-201ENST00000536192 288 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 MIMT1-201ENST00000597105 1050 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 GAS5-AS1-201ENST00000602767 694 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AL157392.4-201ENST00000609756 345 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AL645927.2-201ENST00000618350 349 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AC138965.3-201ENST00000623875 498 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AC139792.2-201ENST00000624218 587 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AC074101.1-201ENST00000637861 241 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 AL445523.1-201ENST00000451184 1362 ntBASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
ZNF549Q6P9A3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 U3.32-201ENST00000408116 212 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 OR3A2-201ENST00000408891 1076 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 RNU4-27P-201ENST00000410889 139 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC093655.2-201ENST00000425735 631 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 TXNL1P1-201ENST00000429528 554 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AC009238.2-201ENST00000431026 355 ntBASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.13□□□□□ -1.59
ZNF549Q6P9A3 SETD6P1-201ENST00000444575 317 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms