Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 MIR298-201ENST00000401212 88 ntBASIC5.75□□□□□ -1.49
RFX7Q2KHR2 RN7SKP106-201ENST00000410832 272 ntBASIC5.75□□□□□ -1.49
RFX7Q2KHR2 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 EIF4A1P1-201ENST00000420241 934 ntBASIC5.75□□□□□ -1.49
RFX7Q2KHR2 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 RPL23AP1-201ENST00000428990 471 ntBASIC5.75□□□□□ -1.49
RFX7Q2KHR2 CNOT7P1-201ENST00000429006 852 ntBASIC5.75□□□□□ -1.49
RFX7Q2KHR2 AC016831.4-201ENST00000438302 307 ntBASIC5.75□□□□□ -1.49
RFX7Q2KHR2 AL031584.1-201ENST00000447169 754 ntBASIC5.75□□□□□ -1.49
RFX7Q2KHR2 AC079168.2-201ENST00000453977 416 ntBASIC5.75□□□□□ -1.49
RFX7Q2KHR2 AC023424.1-201ENST00000496058 459 ntBASIC5.75□□□□□ -1.49
RFX7Q2KHR2 AC091868.1-201ENST00000508746 304 ntBASIC5.75□□□□□ -1.49
RFX7Q2KHR2 AC138938.1-201ENST00000515431 782 ntBASIC5.75□□□□□ -1.49
RFX7Q2KHR2 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 AC133555.2-201ENST00000550213 292 ntBASIC5.75□□□□□ -1.49
RFX7Q2KHR2 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 AL731566.1-201ENST00000620490 1937 ntBASIC5.74□□□□□ -1.49
RFX7Q2KHR2 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 AC125336.1-201ENST00000508893 2827 ntBASIC5.74□□□□□ -1.49
RFX7Q2KHR2 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 RNA5SP397-201ENST00000391323 118 ntBASIC5.74□□□□□ -1.49
RFX7Q2KHR2 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 AL356967.1-201ENST00000406305 431 ntBASIC5.74□□□□□ -1.49
RFX7Q2KHR2 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 RPL36AP10-201ENST00000421785 322 ntBASIC5.74□□□□□ -1.49
RFX7Q2KHR2 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 DNAJC19P7-201ENST00000428811 344 ntBASIC5.74□□□□□ -1.49
RFX7Q2KHR2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 CYCSP34-201ENST00000458172 304 ntBASIC5.74□□□□□ -1.49
RFX7Q2KHR2 HPRT1P1-201ENST00000509498 657 ntBASIC5.74□□□□□ -1.49
RFX7Q2KHR2 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 AC016839.1-201ENST00000578162 867 ntBASIC5.74□□□□□ -1.49
RFX7Q2KHR2 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 MIR4472-2-201ENST00000582069 67 ntBASIC5.74□□□□□ -1.49
RFX7Q2KHR2 MIR4715-201ENST00000584117 79 ntBASIC5.74□□□□□ -1.49
RFX7Q2KHR2 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 MIR6758-201ENST00000620653 63 ntBASIC5.74□□□□□ -1.49
RFX7Q2KHR2 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 AL592148.3-201ENST00000608771 2646 ntBASIC5.74□□□□□ -1.49
RFX7Q2KHR2 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
RFX7Q2KHR2 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 OR4K15-201ENST00000305051 1216 ntBASIC5.73□□□□□ -1.49
RFX7Q2KHR2 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 NPM1P38-201ENST00000403835 865 ntBASIC5.73□□□□□ -1.49
RFX7Q2KHR2 ATG4AP1-201ENST00000416893 538 ntBASIC5.73□□□□□ -1.49
RFX7Q2KHR2 AL445433.1-201ENST00000457507 257 ntBASIC5.73□□□□□ -1.49
RFX7Q2KHR2 RPL36AP41-201ENST00000493820 306 ntBASIC5.73□□□□□ -1.49
RFX7Q2KHR2 AC073358.1-201ENST00000505671 684 ntBASIC5.73□□□□□ -1.49
RFX7Q2KHR2 AC025674.1-201ENST00000507074 324 ntBASIC5.73□□□□□ -1.49
RFX7Q2KHR2 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 AP005119.2-201ENST00000579735 1105 ntBASIC5.73□□□□□ -1.49
RFX7Q2KHR2 AL034374.2-201ENST00000605281 548 ntBASIC5.73□□□□□ -1.49
RFX7Q2KHR2 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 KARSP3-201ENST00000571212 1504 ntBASIC5.73□□□□□ -1.49
RFX7Q2KHR2 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
RFX7Q2KHR2 AL356317.1-201ENST00000396110 1436 ntBASIC5.72□□□□□ -1.49
RFX7Q2KHR2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms