Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AL442639.1-201ENST00000625030 1899 ntBASIC5.81□□□□□ -1.48
PDS5AQ29RF7 AC063976.2-201ENST00000425667 3556 ntBASIC5.81□□□□□ -1.48
PDS5AQ29RF7 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.81□□□□□ -1.48
PDS5AQ29RF7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.81□□□□□ -1.48
PDS5AQ29RF7 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDS5AQ29RF7 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDS5AQ29RF7 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.81□□□□□ -1.48
PDS5AQ29RF7 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDS5AQ29RF7 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
PDS5AQ29RF7 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDS5AQ29RF7 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
PDS5AQ29RF7 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 AL590240.1-201ENST00000334118 313 ntBASIC5.8□□□□□ -1.48
PDS5AQ29RF7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 RNA5SP397-201ENST00000391323 118 ntBASIC5.8□□□□□ -1.48
PDS5AQ29RF7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 DHFRP5-201ENST00000406944 564 ntBASIC5.8□□□□□ -1.48
PDS5AQ29RF7 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 AL451139.1-201ENST00000434718 346 ntBASIC5.8□□□□□ -1.48
PDS5AQ29RF7 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 AL356981.1-201ENST00000454879 684 ntBASIC5.8□□□□□ -1.48
PDS5AQ29RF7 GYG1P1-201ENST00000460864 698 ntBASIC5.8□□□□□ -1.48
PDS5AQ29RF7 AC091868.1-201ENST00000508746 304 ntBASIC5.8□□□□□ -1.48
PDS5AQ29RF7 OR51K1P-201ENST00000510214 950 ntBASIC5.8□□□□□ -1.48
PDS5AQ29RF7 RNU2-30P-201ENST00000516209 141 ntBASIC5.8□□□□□ -1.48
PDS5AQ29RF7 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 HNRNPRP2-201ENST00000528421 743 ntBASIC5.8□□□□□ -1.48
PDS5AQ29RF7 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 AC091948.2-201ENST00000636510 279 ntBASIC5.8□□□□□ -1.48
PDS5AQ29RF7 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
PDS5AQ29RF7 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AL132640.2-201ENST00000559968 1698 ntBASIC5.79□□□□□ -1.48
PDS5AQ29RF7 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 OR4K15-201ENST00000305051 1216 ntBASIC5.79□□□□□ -1.48
PDS5AQ29RF7 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 RPL12P20-201ENST00000475538 479 ntBASIC5.79□□□□□ -1.48
PDS5AQ29RF7 RPL23AP72-201ENST00000492447 435 ntBASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AC079075.1-201ENST00000559543 878 ntBASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AC068790.4-201ENST00000602474 263 ntBASIC5.79□□□□□ -1.48
PDS5AQ29RF7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AC008745.1-201ENST00000604064 271 ntBASIC5.79□□□□□ -1.48
PDS5AQ29RF7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.79□□□□□ -1.48
PDS5AQ29RF7 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AC021106.3-201ENST00000623925 531 ntBASIC5.79□□□□□ -1.48
PDS5AQ29RF7 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AC073869.10-201ENST00000642016 354 ntBASIC5.79□□□□□ -1.48
PDS5AQ29RF7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AC004817.4-201ENST00000602396 3625 ntBASIC5.79□□□□□ -1.48
PDS5AQ29RF7 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AL603750.1-201ENST00000624216 1717 ntBASIC5.79□□□□□ -1.48
PDS5AQ29RF7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AC025574.1-201ENST00000554784 1653 ntBASIC5.79□□□□□ -1.48
PDS5AQ29RF7 AC022893.2-201ENST00000564832 3296 ntBASIC5.78□□□□□ -1.48
PDS5AQ29RF7 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDS5AQ29RF7 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
PDS5AQ29RF7 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
PDS5AQ29RF7 ATG4AP1-201ENST00000416893 538 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms