Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC099521.1-201ENST00000482557 334 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 AC097173.1-201ENST00000505862 819 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 AC098799.3-201ENST00000506095 438 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 ARL4AP2-201ENST00000507378 601 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 AC024589.1-201ENST00000512207 263 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDH1Q08174 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 AP004607.5-201ENST00000532034 217 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 AC123904.3-201ENST00000547218 814 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 PPIAP6-201ENST00000557078 499 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 HMGB1P33-201ENST00000563485 527 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 AC060780.3-201ENST00000589464 80 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 RPS27AP19-201ENST00000597285 458 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.52□□□□□ -1.37
PCDH1Q08174 PTCHD3P1-201ENST00000612350 537 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 AC234782.5-201ENST00000617723 324 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDH1Q08174 AC093591.3-201ENST00000634516 308 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDH1Q08174 DLEU2L-201ENST00000371086 3555 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 ICE2P1-201ENST00000512800 1849 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
PCDH1Q08174 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDH1Q08174 ZNF806-201ENST00000438300 1774 ntBASIC6.52□□□□□ -1.37
PCDH1Q08174 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.52□□□□□ -1.37
PCDH1Q08174 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDH1Q08174 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDH1Q08174 RARSP1-201ENST00000542842 1418 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 ADTRP-203ENST00000414691 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDH1Q08174 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDH1Q08174 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDH1Q08174 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDH1Q08174 Y_RNA.160-201ENST00000363677 92 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 RNU1-55P-201ENST00000365510 158 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
PCDH1Q08174 RNU6-780P-201ENST00000391030 104 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 C1DP2-201ENST00000418167 426 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDH1Q08174 GAPDHP57-201ENST00000424400 585 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH1Q08174 BMS1P19-201ENST00000433925 393 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.51□□□□□ -1.37
PCDH1Q08174 AL935212.3-201ENST00000450729 284 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH1Q08174 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH1Q08174 AL139156.3-201ENST00000454802 394 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 OR52A4P-201ENST00000472867 958 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH1Q08174 RPL7AP30-201ENST00000482859 796 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 RPL10P7-201ENST00000495649 625 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 RNF138P1-201ENST00000502765 546 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 MTCYBP17-201ENST00000503579 789 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH1Q08174 AC083906.1-201ENST00000509298 406 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDH1Q08174 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH1Q08174 AK6P1-201ENST00000540219 478 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 TRAV15-201ENST00000556680 249 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH1Q08174 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDH1Q08174 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH1Q08174 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH1Q08174 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH1Q08174 AC126323.4-201ENST00000566935 234 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 AL391840.1-201ENST00000571144 367 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 SNORD39.2-201ENST00000579995 76 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH1Q08174 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH1Q08174 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDH1Q08174 AC010200.2-201ENST00000605098 235 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 AC090525.3-201ENST00000605601 189 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH1Q08174 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC6.51□□□□□ -1.37
PCDH1Q08174 AP002505.2-201ENST00000623585 696 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 ABBA01000935.2-201ENST00000637477 838 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.51□□□□□ -1.37
PCDH1Q08174 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDH1Q08174 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
PCDH1Q08174 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
PCDH1Q08174 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
PCDH1Q08174 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.51□□□□□ -1.37
PCDH1Q08174 CTNNA1P1-201ENST00000515849 2728 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 AC007012.2-201ENST00000623206 1676 ntBASIC6.51□□□□□ -1.37
PCDH1Q08174 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
PCDH1Q08174 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
PCDH1Q08174 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms